Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02357 ATGGACCAGGAACAACCGTCTCTGTTTGATGCTAACTTGGACCAGGAACCCTACCTTCAAAATGTCACCGAGATTATTGAGACTATTTCCTCGGAGGATCTTCAATCGATGGTAAAGATTTGTATTGAATGGCTACAATCGTCGTCGGTCGTCGTGAAACGATCGGCGACAATGAATCTGAGGTTGTTGGAGAAGAATCGAGTGGAAAATCGTGCTCTAATCGGCGAGTCCAATGTGTTTCATGCTTTGGTTCCGCTACTCCGGTGCATTGATCCATGGACGCAGGAACACGTCGTTACGGTGTTGTTGAATCTATCTCTTCTTGAAGACAACAAGACATTGATAACCAACGTCGGTTCGGTTAAGTCACTTGTTTATGTGCTTAAAACAGGGATAGAAAACAGAACGCGAAATATACGCTTTTGTGCTTCGGTTCAGGTCGGTTTGTTCGGATTTCAAACTGTACAACCCGAATCGAATACCATCGTGTTCCTACTTTTCAGACCCAAACCGAACCAATAA 522 0.4425 MDQEQPSLFDANLDQEPYLQNVTEIIETISSEDLQSMVKICIEWLQSSSVVVKRSATMNLRLLEKNRVENRALIGESNVFHALVPLLRCIDPWTQEHVVTVLLNLSLLEDNKTLITNVGSVKSLVYVLKTGIENRTRNIRFCASVQVGLFGFQTVQPESNTIVFLLFRPKPNQ* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02357 173 SUPERFAMILY ARM repeat 33 131 IPR016024 -
Rops11g02357 173 Gene3D - 14 144 IPR011989 -
Rops11g02357 173 PANTHER U BOX DOMAIN-CONTAINING 36 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02357 Rops-Chr11 39687724 39688245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02357 33 131 U-box Gene Family AT2G23140 43.434 2.86e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02357 - - vvi:100854922 162.925