Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02356 ATGTCGAAGGCGATTTGTGTCACCGGAGCCAGCGGCGCCATCGGATCATGGGTGGTTAAACTCCTCCTTGACCGTGGCTACACCGTCCACGCCACCGTCCAAGATCTCAAGGATGAGAATGAGACCAAACATTTGGAGGCAATGGAAGGAGCTAAAAGTCGTCTCCGTTTTTTTGAGATGGATCTTCTTGACAGCGTCTCCATCGCTGCCGCCATAAAGGGTTGTGCCGGTGTTATCCACCTTGCATGTCCTAACGTCATTGGTGAAGTCAAAGATCCTGAGAAGCAAATTTTGGAACCGGCGATTAAAGGAACGATTGATGTGTTGAAGGCGGCGAAGGAAGCAGGGGCGGAGCGTGTGGTGGCGACTTCGTCGATCTCCGCCATCATGCCGAGTCCTAATTGGCCAGCTGATAAGATTAAGGGAGAGGACTGTTGGACGGATCTTGATTATTGCCGGGAGAAGGGGTTATACTATCCAATTGCAAAGACTCTAGCAGAGAAAGCAGGCTGGAATTTTGCTAAGGAGACAGGTTTCGATGTGGTGATGATAAACCCTGGCACAGCCTTGGGCCCTCTCATTCCACCAAGAATCAATTCCAGCATGGCTGTGCTTGCTGGCGTCCTCAAAGGCGACAAAGAGACTTACGAGGAGTTCTTTATGGGAATGGCTCACTTTAAAGATATAGCCATGGCACATATTTTGGCGTTTGAGAACAAGAAAGCATCTGGGAGGCACTTATGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTGGAGATTGTTGCTGACTTATACCCTGAATACAATGTGGTTAGGTTGCTAAAGGATACCCAACCTGGGTTGTTGAGAGCAAAGAATGCATCAAAGAAATTGATTGAATTAGGTATGGAGTTCACTCCAGCTGAACAAATTATCAAGGATGCAGTGGAGTGTTTGAAGAGCAGGGGTTATGTCTAA 960 0.4771 MSKAICVTGASGAIGSWVVKLLLDRGYTVHATVQDLKDENETKHLEAMEGAKSRLRFFEMDLLDSVSIAAAIKGCAGVIHLACPNVIGEVKDPEKQILEPAIKGTIDVLKAAKEAGAERVVATSSISAIMPSPNWPADKIKGEDCWTDLDYCREKGLYYPIAKTLAEKAGWNFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDKETYEEFFMGMAHFKDIAMAHILAFENKKASGRHLCVEAIRHYSDFVEIVADLYPEYNVVRLLKDTQPGLLRAKNASKKLIELGMEFTPAEQIIKDAVECLKSRGYV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02356 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Rops11g02356 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Rops11g02356 319 CDD FR_SDR_e 6 296 - -
Rops11g02356 319 Gene3D - 1 319 - -
Rops11g02356 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 310 - -
Rops11g02356 319 Pfam NAD dependent epimerase/dehydratase family 5 244 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02356 Rops-Chr11 39678244 39684173 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02356 3 319 Monolignol Biosynthesis Gene Families AT5G58490 64.353 2.36e-160 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02356 - - gmx:100806281 556.214