Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02355 ATGCCAATGGCCTCTTTCATCTTATTCACTCTTCTTCTTCTTCTATTGATTTTCCATTTTCAACATTCCTCTTCGTTCTCCCTCTCCGTCGAAAAACTTGAAGAAGACATTATAGTCTCACCCAAAGGCAAATTCACCACAGGCTTTTATCCAGTAGGGGAAAATGCTTATTGCTTTGCCATATGGTTCACCCAACCTCATGAAAATCTCCAGAATGCCACTGTTGTTTGGATGGCAAACCGTGACCAACCAGTTAACGGAAAACATTCAACACTTTCCCTTCTCAAGACAGGTAACCTCGTCTTAACCGATGCAGACCAGTTCGATGTTTGGTCCACAAACACTGTCTCATCAAACCCACTTGAGTTGTTTTTGTTCGACACCGGCAACCTCGTACTCCGAGAGAAGAACAATAATGGTTTGGTCTTGTGGCAAAGCTTTGATTTCCCAACAGACACGCTCCTCCCAGATCAAGCTCTCACTAGGTACATGAAACTTGTTTCCTCTAGAAGTGAGTGCAACTATTCCTCGGGTTTCTACAAGCTATTCTTTGACAACGACAATGTTCTTCGTCTTCTCTATGATGGTCCTCGAGTTTCAAACGTTTACTGGCCAGATCCTTCGCTTGTGAGCTGGGAAGCTGGTAGATCCACTTATGACAGTAGCAGGGTTGCAACATTAGATCGTTTGGGGAACTTTAGTTCTTCAGATGATTTCACTTTTACGACAAGCGATTATGGGACAGTGCTTCAACGAAGATTAACCCTTGATCACGATGGTAATCTTCGTGTTTATAGCCGGAAAGATGGAAAAGAGAAGTGGTCGGTAACAGGGCAAATCCAACAACAACCTTGTAAGATTCATGGACTTTGTGGACCCAATAGCACTTGCAGTTATGATCCCAGAACTGGTAGGAAGTGTTGGTGTCTTCCAGGGTACAGCAGGATCGACAATCAAGATTGGTCTCAAGGGTGCAAGCCAAACTTCCAACTTTCATGCAACAACAAGACAGAGTCTCGCTTCCAATTGTTACCCCATGTCAATTTTTATGGATACGAGTATGGGACCTATGAAAATTATACTTATAAACAATGTATGAATCTGTGCTTGGGATTGTGCAAATGCAAAGGCTTTCAGCTGCGGTTTTTGGTGCACAAGGGTGTCTCTAGATGTTTACTAAAGACGCAGTTGCTAAATGGACATCATTCACCAAGTCATCGAGGATCATTCTTCTTGCGTTTGCCGAAAAGCTGTGTTTTCTCCAGTGAGAACTCCGCCAAAGATAATGGCTTGGTTTGTTCGAGACATCGAGCAAAACAACTGGAAAGATCATACGTCAAAGGCAAAGAAAATGGATCGGTGAAGTTTTTCCTTCGGTTTGCTAGTGGCTTGGGAGGCATTGAGGTGGTGTGCTTTTTTCTGGTCTGGATAAGAGGAACAAGGGGTTACATGGCACCAGAATGGGTTTTCAACTTGTCCATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTCTCTTGGAAATGATCACTGGGAGGAACCCAACAACAGGTATCCAAATCACGGATGGAGGAGAGTCACATAACGAGAGGTTGGGAACATGGGTGAGGGAGAAAAGAAGGAACGGGTCAGGAGTAACGTCTTGGGTGGAACAAATCGTTGACCCAGATTTGGGATCAAATTATGACATGAACAAAATGGAGATATTGGCCATTGTGGCTTTGGAATGTGTAGCTGAAGAGAAGGACGAAAGACCCAGCATGAGTCAAGTCGTTGAGAGGCTCCAAAGTCATGAACATGATTCTTGA 1812 0.4371 MPMASFILFTLLLLLLIFHFQHSSSFSLSVEKLEEDIIVSPKGKFTTGFYPVGENAYCFAIWFTQPHENLQNATVVWMANRDQPVNGKHSTLSLLKTGNLVLTDADQFDVWSTNTVSSNPLELFLFDTGNLVLREKNNNGLVLWQSFDFPTDTLLPDQALTRYMKLVSSRSECNYSSGFYKLFFDNDNVLRLLYDGPRVSNVYWPDPSLVSWEAGRSTYDSSRVATLDRLGNFSSSDDFTFTTSDYGTVLQRRLTLDHDGNLRVYSRKDGKEKWSVTGQIQQQPCKIHGLCGPNSTCSYDPRTGRKCWCLPGYSRIDNQDWSQGCKPNFQLSCNNKTESRFQLLPHVNFYGYEYGTYENYTYKQCMNLCLGLCKCKGFQLRFLVHKGVSRCLLKTQLLNGHHSPSHRGSFFLRLPKSCVFSSENSAKDNGLVCSRHRAKQLERSYVKGKENGSVKFFLRFASGLGGIEVVCFFLVWIRGTRGYMAPEWVFNLSITSKVDVYSYGIVLLEMITGRNPTTGIQITDGGESHNERLGTWVREKRRNGSGVTSWVEQIVDPDLGSNYDMNKMEILAIVALECVAEEKDERPSMSQVVERLQSHEHDS* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02355 603 FunFam Putative receptor protein kinase ZmPK1 19 149 - -
Rops11g02355 603 SUPERFAMILY Protein kinase-like (PK-like) 473 596 IPR011009 -
Rops11g02355 603 PANTHER OS07G0415500 PROTEIN 7 477 - -
Rops11g02355 603 Gene3D - 31 148 IPR036426 -
Rops11g02355 603 Pfam S-locus glycoprotein domain 236 314 IPR000858 GO:0048544
Rops11g02355 603 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Rops11g02355 603 Gene3D Transferase(Phosphotransferase) domain 1 469 603 - -
Rops11g02355 603 SMART blect_4 29 150 IPR001480 -
Rops11g02355 603 Pfam D-mannose binding lectin 74 162 IPR001480 -
Rops11g02355 603 Gene3D - 149 276 IPR036426 -
Rops11g02355 603 FunFam Serine/threonine-protein kinase 151 278 - -
Rops11g02355 603 CDD B_lectin 38 150 IPR001480 -
Rops11g02355 603 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 204 IPR036426 -
Rops11g02355 603 CDD PAN_AP_plant 329 415 - -
Rops11g02355 603 ProSiteProfiles PAN/Apple domain profile. 333 418 IPR003609 -
Rops11g02355 603 Pfam Protein kinase domain 478 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02355 Rops-Chr11 39665953 39668368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02355 477 597 Receptor kinase-like Gene Family AT4G02010 38.017 1.35e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops11g02355 Pkinase 7.5e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02355 - - gmx:100806357 613.224