Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02354 ATGCTTACTGCTTCACCATATGGAAACCTCGTTTTAACCGACGCAGACCAGTTCAACGTTTGGTCCACAAACACTTCCTCATCCAACCCACTTGAGTTGCTCTTGTACGACACTGGGAACCTCGTTCTGAGAGAGCAACACAATAATGGTTTCGTTCTGTGGCAAAGCTTTAATTTCCCAACAGATACTCTCCTTCCTTATCAAAGTCTCACCACTTACATGAAGCTTGTTTCCTCCACCGGTTTCAACCAGTTGTTGTTCGACAACGACAATATTCTCCGTCTTGTTTACGAAGGCCCTCGAGTTTCAAGTGTTTACTGGCCATATCCTTTGAGCGGCCAAGCTGGTAGAACCACTTACAATAGTAGCAGGATTGCAGTACTAGATCTTTTTGGGAACTTCACTTCTTCCGATCATTTCACTTTAAGTACAAGTGATTATGGGACACTACTCCAACGAAGACTGACCCTTGATCATGATGGTAGTCTTCGTATTTATAGTAGAAAAGATGGACAAGAGAAGTGGTCGGTAACATGGCAAGTCCGTCAAGAACCTTGTTTCATTCATGGGATTTGTGGACCCAATAGTTTTTGCCATTATGATACAATAAGTGGTAGAAAGTGTTCATGTCTTCCAAGCCATGACTGGATCGACGATCAAGACTGGTCTCAAGGGTGCAAAGCAAAGTTCCAAATTTCACGTGACAGCAAGACCGAAATGTATGGATCTGTGCTTTCCAAAGCTGCAATTGCGGAGGCCAATGGTTACTATTTGTGTTTTCCAAAGCTGCAATTGCTAAATGGGCATCGTTCACCTGATTTCTTGGTATCAATATCCTTGCGATTGCCAAAAAGCAGTGATTTGTCCTATGAGAACCCCATAGGAGATAATGGCTCGGTTTCTTTGACAAATGCATCAAAACAACTGGAAAGAGCATACGTCCAGGCCAAAGAAAATGGATCGGTGAAGTTCATGCTTTGGTTTGCAAGTGGCTTGGGAGGTATTGAGGTCGTGTGCTTCTTTCTGGTATGGAGTTTCTTAATTTGGAATGGGAATCAGTTCGGTGCAGACAGACAAGGCTACGTTCTAGCAGCAGCAACGGGGTTTCGGAAATTCAGTTACTCTGAACTGAAACAAGCTACAAAAGAGGGAAAGCACAGATTGTTGGTTTGTGAGTACATGGAAAATGGTTCTTTAGCTGAGAATCTCTCATCAAATTCACTTGATTGGAATAAGAGATATAACATTGCTCTGGGAACAGCAAGGGGTCTGGCCTATTTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATAAAGCCCCAAAACATACTTCTTGACTCTGATTACAAACCCAAGGTGAGGAAGAAAAGCAGGAACGGGTCAGGAGTAACATCTTGGGTGGAACAAATTGTTGACCCTGCATTGGGTTCAAATTATGACATTAACAAAATGGAGATTTTGGCCATAGTGGCTTTAGATTATGTAGAGGAAGAGAGATACATGAGACCTAGCATGAGTCAAGTTGTCGAGAGGCTCCAAAGTCATGAACATAATTCTTGA 1566 0.4253 MLTASPYGNLVLTDADQFNVWSTNTSSSNPLELLLYDTGNLVLREQHNNGFVLWQSFNFPTDTLLPYQSLTTYMKLVSSTGFNQLLFDNDNILRLVYEGPRVSSVYWPYPLSGQAGRTTYNSSRIAVLDLFGNFTSSDHFTLSTSDYGTLLQRRLTLDHDGSLRIYSRKDGQEKWSVTWQVRQEPCFIHGICGPNSFCHYDTISGRKCSCLPSHDWIDDQDWSQGCKAKFQISRDSKTEMYGSVLSKAAIAEANGYYLCFPKLQLLNGHRSPDFLVSISLRLPKSSDLSYENPIGDNGSVSLTNASKQLERAYVQAKENGSVKFMLWFASGLGGIEVVCFFLVWSFLIWNGNQFGADRQGYVLAAATGFRKFSYSELKQATKEGKHRLLVCEYMENGSLAENLSSNSLDWNKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVRKKSRNGSGVTSWVEQIVDPALGSNYDINKMEILAIVALDYVEEERYMRPSMSQVVERLQSHEHNS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02354 521 ProSiteProfiles Bulb-type lectin domain profile. 1 56 IPR001480 -
Rops11g02354 521 Pfam D-mannose binding lectin 2 73 IPR001480 -
Rops11g02354 521 SUPERFAMILY Protein kinase-like (PK-like) 381 455 IPR011009 -
Rops11g02354 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Rops11g02354 521 ProSiteProfiles Protein kinase domain profile. 288 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02354 521 Gene3D Transferase(Phosphotransferase) domain 1 374 456 - -
Rops11g02354 521 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 78 IPR036426 -
Rops11g02354 521 Gene3D - 1 108 IPR036426 -
Rops11g02354 521 Pfam S-locus glycoprotein domain 138 212 IPR000858 GO:0048544
Rops11g02354 521 Pfam Protein kinase domain 377 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02354 521 PANTHER OS07G0415500 PROTEIN 8 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02354 Rops-Chr11 39640858 39643498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02354 383 509 Receptor kinase-like Gene Family AT1G56120 43.182 7.17e-19 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops11g02354 Pkinase 3.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02354 - - gmx:100806357 456.832