Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02353 ATGAAAGTGATCGAATACTACACTCCGTCACAGTTATACTATCCCATTGCAAAGACTCTAGCAGAGAAAGCAGGCTGGGATTTTGCTAAAGAGACAGGTTTCGATGTGGTTATGATAAATTCTGGAACAGAATTGGGCCCTCTCATTCCACCAAGAATCAATTCCAGCATGGCTGTGCTTGCTGGCGTCCTCAAAGGTGACAAAGAGACTTACGAGGAGTTCTTTATGGGAATGGCTCACTTTAAAGATATAGCCATGGCACATATTTTGGCGTTTGAGAACAAAAAAGCATCTGGAAGGCACTTATGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTGGAGATTGTTGCTGACTTATACCCTGAATACAATGTGGTTAGGTTGCCAAAGGATACCCAACCTGGGTTGTTGAGAGCAAAGAATGCATCAAAGAAATTGATTGAATTAGGTATGGAGTTCACTCCAGCTGAACAAATTATCAAGGATGCAGTGGAGTGTTTGAAGAGCAAGGGTTATGTCTAA 525 0.4171 MKVIEYYTPSQLYYPIAKTLAEKAGWDFAKETGFDVVMINSGTELGPLIPPRINSSMAVLAGVLKGDKETYEEFFMGMAHFKDIAMAHILAFENKKASGRHLCVEAIRHYSDFVEIVADLYPEYNVVRLPKDTQPGLLRAKNASKKLIELGMEFTPAEQIIKDAVECLKSKGYV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02353 174 Gene3D - 2 174 - -
Rops11g02353 174 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 165 - -
Rops11g02353 174 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 168 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02353 Rops-Chr11 39625471 39630795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02353 5 174 Monolignol Biosynthesis Gene Families AT5G58490 61.176 1.40e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02353 - - gmx:100806281 281.567