Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02351 ATGCCAATGGCCTCCTCAATCTTATTCGCTCTTTTTCTTCTTTTGATTTTCCATTTTGATCATTCCTCTTCATTCACCCTCTCCGTGGAAAAACATGAAGAAGACGTTATAGTTTCCCCCAACGGCAAATTCACCGCAGGGTTTTATCCCGTAGGGGAAAATGCTTACTGCTTCACCATATGGTTCACCCAACCCCATAAAAATCTCCACAATGCCACGGTTGTTTGGATGGCAAACCGTGATCAACCAGTGAACGGAAAACGTTCAACACTTTCCCTTCTCAAGACAGGTAACCTCGTTTTAACCGACGCAGACCAGTTCAATGTTTGGTCCACAAAAACTGCCTCATCCAACCCACTTGAGTTGCTCTTGTACGACACTGGGAACCTCGTTCTCATAGAGCAGAACAATAATGGTGTCGTTCTGTGGCAAAGCTTTGATTTCCCAACAGATACGCTCCTTCCTTATCAAAGTCTCACCACATACATGAAGCTTGTTTCCTCCACAAGTGAAGGCAACTATTCCACTGGTTTCTACCAGTTGTTGTTCGACAACGACAATATTCTCCGTCTTGTTTACGAAGGCCCTCGAGTTTCAAGTGTTTACTGGCCATATCCTTGGCTTTTGAGCAGTCAAGCTGGTAGAACCACTTACAATAGTAGCAGGATTGCAGTATTAGATCGTTTTGGGAACTTCACTTCTTCCGATAATTTCACTTTAAGTACAAGTGATTATGGGACACTACTCCAACGAAGACTGACCCTTGATCATGATGGTAATCTTCGTGTTTACAGTAGAAAAGATGGACAAGAGAAGTGGTCGGTAACATGGCAAGTCCGTCAAGAACCTTGTTTCATTCATGGGGTTTGTGGACCCAATAGTTTTTGCCATTATGATACAAGAAGTGGTAGAAAGTGTTCATGTCTTCCAGGCTATGACTGGATCGACGATCAAGACTGGTCTCAAGGGTGCAAAGCGAAGTTCCAAATTTCATGTGACAGCAAGATCGAGTATCAATTCCAGTTATTACCCCATGTTGATTTTTATGGTTACGACTATGGGTCCTATGGAAATTACACCTATAAAGAATGTATGGATCTGTGCTTGCAATTGTGCGGATGTGTTGGCTTCCAACACACCTTTGCGGAGGACAATGGTTACTATTGGTGTTTTCCAAAGCTGCAATTGCTAAATGGGCATCGTTCACCTGGTTTCGTGGGATCAATATCCTTGCGATTGCCCAAAAGCAGTGATTTGTCCTATGAGAACCCCATAGGAGACAATGGCTCGGTTTGTTTGACAAATGCATCAAAACAACTGGAAAGAGCATACGTCAAGGCCAAAGAAAATGGATCGGTGAAGTTCATGCTTTGGTTTGCAAGTGGCTTGGGAGGAATTGAGGTCGTGTGCTTCTTTCTGGTGTGGTGTTTCTTAATTAGGAATGGGAATCAGTTCGATGCAGACAAACAAGGCTACGTTCTAGCAGCAGCAACAGGGATAAGAGGAACAAGAGGTTACATGGCACCAGAATGGGTTTTCAACTTGTCCATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTCTCTTGGAAATGATAACTGGGAGGAACCCAACAACAGGTGTCCAAATCACAGATGGAGGAGACTCACATAACGAGAGGTTGGTAACATGGGTGAGGGAGAAAAGAAGGAACGGATCAGGAGTAACATCTTGGGTGGAACAAATCGTTGACCCAGATTTGGGATCAAATTATGACATGAATAAAATGGAGATATTGGCCATTGTGGCTTTGGAATGTGTAGCTGAAGAGAAGGACGTAAGACCCAGCATGAGTCAAGTCGTTGAGAGGCTCCAAAGTCATGAACATGATTCTTGA 1881 0.4354 MPMASSILFALFLLLIFHFDHSSSFTLSVEKHEEDVIVSPNGKFTAGFYPVGENAYCFTIWFTQPHKNLHNATVVWMANRDQPVNGKRSTLSLLKTGNLVLTDADQFNVWSTKTASSNPLELLLYDTGNLVLIEQNNNGVVLWQSFDFPTDTLLPYQSLTTYMKLVSSTSEGNYSTGFYQLLFDNDNILRLVYEGPRVSSVYWPYPWLLSSQAGRTTYNSSRIAVLDRFGNFTSSDNFTLSTSDYGTLLQRRLTLDHDGNLRVYSRKDGQEKWSVTWQVRQEPCFIHGVCGPNSFCHYDTRSGRKCSCLPGYDWIDDQDWSQGCKAKFQISCDSKIEYQFQLLPHVDFYGYDYGSYGNYTYKECMDLCLQLCGCVGFQHTFAEDNGYYWCFPKLQLLNGHRSPGFVGSISLRLPKSSDLSYENPIGDNGSVCLTNASKQLERAYVKAKENGSVKFMLWFASGLGGIEVVCFFLVWCFLIRNGNQFDADKQGYVLAAATGIRGTRGYMAPEWVFNLSITSKVDVYSYGIVLLEMITGRNPTTGVQITDGGDSHNERLVTWVREKRRNGSGVTSWVEQIVDPDLGSNYDMNKMEILAIVALECVAEEKDVRPSMSQVVERLQSHEHDS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02351 626 CDD EGF 283 312 - -
Rops11g02351 626 CDD B_lectin 37 149 IPR001480 -
Rops11g02351 626 ProSiteProfiles Protein kinase domain profile. 163 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02351 626 SMART blect_4 28 149 IPR001480 -
Rops11g02351 626 Pfam D-mannose binding lectin 73 161 IPR001480 -
Rops11g02351 626 Pfam S-locus glycoprotein domain 234 312 IPR000858 GO:0048544
Rops11g02351 626 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 204 IPR036426 -
Rops11g02351 626 Pfam Protein kinase domain 497 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02351 626 CDD PAN_AP_plant 328 414 - -
Rops11g02351 626 SUPERFAMILY Protein kinase-like (PK-like) 496 617 IPR011009 -
Rops11g02351 626 Gene3D - 23 148 IPR036426 -
Rops11g02351 626 Gene3D Transferase(Phosphotransferase) domain 1 477 626 - -
Rops11g02351 626 FunFam Serine/threonine-protein kinase 150 277 - -
Rops11g02351 626 ProSiteProfiles Bulb-type lectin domain profile. 22 145 IPR001480 -
Rops11g02351 626 FunFam Putative receptor protein kinase ZmPK1 18 148 - -
Rops11g02351 626 PANTHER OS07G0415500 PROTEIN 6 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02351 Rops-Chr11 39600024 39602651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02351 495 626 Receptor kinase-like Gene Family AT2G28250 34.091 1.56e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops11g02351 Pkinase 8.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02351 - - gmx:100806357 667.537