Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02349 ATGGAGAAAATCCTGGAAGAATCATTGGTTCAGTTGAATGATGATGTGGATGTGAATGATGAGTGTCCAATGACAAATTCTGATAATGGGGTACAAAAAGATGGTGTTTATAAGAGTGTGACAGAGTTGAATGATGATGACATTTTACATTTAGAGTTTGGCAGTGAAGAGGAAGCTATAGAATTTTATAAAATGTATGCAATGTATCATGGATTCATTGTTAGGAAAGATGATGTGTATAGAGATGTGAAGGGGAAAGTTGTCATGCGGCAATTAGTATGCAATACATCTGGTTTAAGAAACAAGAAACATATTGGAAGGGTGGACAGAATAAGAGACCATAAACCAATCATGCGGATGAATTGTGATGCAAAGTTTAGGGTCGATTTTAACTACAGTAGTCTGAAATGGAGGGTTGTCTCTTTTTAG 429 0.359 MEKILEESLVQLNDDVDVNDECPMTNSDNGVQKDGVYKSVTELNDDDILHLEFGSEEEAIEFYKMYAMYHGFIVRKDDVYRDVKGKVVMRQLVCNTSGLRNKKHIGRVDRIRDHKPIMRMNCDAKFRVDFNYSSLKWRVVSF* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02349 142 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 142 - -
Rops11g02349 142 Pfam FAR1 DNA-binding domain 61 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02349 Rops-Chr11 39567715 39568143 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g02349 FAR1 5.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02349 - - ccaj:109792835 139.428