Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02337 ATGGCACCAGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTAGATGTTTACAGCTATGGCATTGTTGTCTTGGAGGTGATAACCGGAAGGAGCCCTAGAACAGGTATCCAAATCATAGATGGAGCAGAGTCACATAACGAGAAGTTGGTAACATGGGTGAGGGAGAAAAGAAGGAAAGGATCAGAAGTGGCATCTTGGGTGGAACAAATCGTTGACCCAGCATTGGGATCAAATTATGACATGAATAAAATGGAGATTTTGGCAACGGTTGCTTTGGAATGTGTAGAGGAAGAGAAAGGCATGAGACCCAGCATGGGTCAAGTTGCTGGAGGCTCCAAATTCATGGATAAGAGTATTGATGTTTTGCTGAGAGGCTCTCACTTACCCTGTTTATCATCCTCCGTTCCAGCTCCTAATGATAAATATTAA 432 0.4352 MAPEWVFNLPITSKVDVYSYGIVVLEVITGRSPRTGIQIIDGAESHNEKLVTWVREKRRKGSEVASWVEQIVDPALGSNYDMNKMEILATVALECVEEEKGMRPSMGQVAGGSKFMDKSIDVLLRGSHLPCLSSSVPAPNDKY* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02337 143 Gene3D Transferase(Phosphotransferase) domain 1 1 122 - -
Rops11g02337 143 PANTHER OS07G0415500 PROTEIN 1 111 - -
Rops11g02337 143 Pfam Protein tyrosine and serine/threonine kinase 1 108 IPR001245 GO:0004672|GO:0006468
Rops11g02337 143 SUPERFAMILY Protein kinase-like (PK-like) 1 117 IPR011009 -
Rops11g02337 143 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02337 Rops-Chr11 39313131 39313562 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02337 1 122 Trihelix Transcription Factor Family AT5G38560 33.607 2.57e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops11g02337 PK_Tyr_Ser-Thr 3.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02337 - - lja:Lj0g3v0305959.1 183.726