Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02333 ATGGCACCAGAATGGGTTTTCAACTTGCCCATCACTTCCAAGGTAGATGTTTACAGCTATGGCATTGTTGTCTTGGAGATGATAACTGGAAGGAGCCCTACAACAGGTATCCAAAACACAGATGGAGCAGAGTCACATAATGAGAGGTTGGTAACATGGGTGAGGGAGAAAAGGAGGAATGGGTCAGAAGTAACATCTTGGGTGGAACAAATCGTTGACCCTGCTTTGGGTTCGAATTATGACATGAATAAAATGGAGATTTTGGCAACGGTGGCTATGGATTGTGTAGAGGAAGATAAAGACGTGAGACCCAGCATGAGTCTAGTTGCTGAGAGGCTCCAAAGTCATGAGCATGATTCTTGA 363 0.4463 MAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGIQNTDGAESHNERLVTWVREKRRNGSEVTSWVEQIVDPALGSNYDMNKMEILATVAMDCVEEDKDVRPSMSLVAERLQSHEHDS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02333 120 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02333 120 SUPERFAMILY Protein kinase-like (PK-like) 1 111 IPR011009 -
Rops11g02333 120 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Rops11g02333 120 PANTHER OS07G0415500 PROTEIN 1 116 - -
Rops11g02333 120 Pfam Protein kinase domain 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02333 Rops-Chr11 39279461 39282525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02333 1 113 Receptor kinase-like Gene Family AT4G23290 38.938 3.23e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Rops11g02333 Pkinase 6.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02333 - - gmx:100807333 199.519