Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02326 ATGGTTTTCAGAAAACTTCCATGCATGACTAGGTTATTCCCTGCATACCGTTTTCCACAAACACCCAATAATGGATGGCACCACCACCACTTTGTTCCTTTTCGTGTCCTCAAAGAAAACATGGTTAATGGGTCTACAACTTCTCTTCCCGTTGTCTGTAATGCAGCAGAAGAGTTTCACCATTCTAACATCTTTAATGGTGACAATCCTTTAGCTCACTCCTTCCAACTAATAATGTTCAACTTCATTCTCGTCACCACCATCACCCGCATTGTTCGTTTTCTTCTTAAGCCTCTCAAACAACCTATGCTCATCTCTCAGATAATAGGTGGTGTCATTGTTGGACCTTCTGTTCTAGGACGCAGTAAATGGTATCAACGTTACATGAAACCTGAGGCAGCCCAATTCTTGGCTAACAATATTGGAGTGATGGGGTTCGTTTTCTGTATGTTCATTTATGGTGTGAAGTTGGATCCAGCCCTTTGGAAAAAATCAGCAGGAAGAGTGCACATATCTATAGCATTGGTTGGTATGACCATTCCCACAATAGCAATATTTGTTGTGGGACTATGCATGAGAAAGCACTTGGATAAAGAATTAGGCAGTGTTTCTTCAATAGGAGTAATTGCAGGGTTCTTGGGGATCACAGCATTTCCTGATCTCTTTAGTGTCCTCAAAGAGCTTAACCTTCTAAACTCAGACATAGGGCGTAAAGGGTTGTCCATGGCAATGATTGGTGATGCAATTGGCATGGTTACCATTGTAGCATTTGAGGCAGGAAAACAAGGAGAAAATGGAGCAGAGAATGCCTTGTGGTATATGATTTCTCTTGTGATTATGATAATGTTTGTTGTGTTTTGTGTTAAGCCTGCAATGGTATGGATCAATAACAGAACTCTAGAAGGCCACCCAGTTGATCAATCTTTGGTGATTGTCATTCTTTTAGGGGTTTTTGTGATGGGCTTTTTAACTGACATGTTTGGCATAGCAATTGCTAATGGGCCTTTGTGGTTGGGCATTGCAGTTCCAGATGGGCCTGGTTTAGGAGCAACACTAGAAAGCAAGAGCGAGACAATTATGACGGATTTGCTTATGCCATTTTCATTTATTATGGTGGGATCATATATTGATTTTTCTTCATTGAGAGCTACTGATTGGTCCAGTTTGGAGCCATTATTTTTCATGGTTTTAGTTGGCTACTTGACCAAATTCTTTTCCACTTGGATAACGACATTCTATTGGCGTCTCCCATTAAGAGATGGACTAACTCTCAGCCTCATTATGAGCTTAAGAGGCCAAATTGAAATTATATTGTTTGTGCATTTGATGGACAAAAAGATTTTGAAGGTACCAGGCTTCACATTATTGTTGGTTATGACAATAGTATTGACTGCAACTTTCGCTCCTCTGATTTCCATGTTATATGATCCAACAAGGCCATACATGCTGAACCAAAGGAGGAACATCCAACACCACCCTCCAGAAAAAGAACTTAGGATAGTGTTAAGTATTCTTGAAGATGAAACCATAAATGGACCCATCAATCTACTTGATGCCTCTAATCCAACCACAAGTAGCCCCCTTTCAGTTTATGCTCTTAGAGTTTTCGAGCTTGTAGGCCATGCTAACCCATTATTCATAAACCATGCAAAACAAGAGGTGCCTCACATTTACCAATGGACACACACCATTAACACACTTGAAAGTTATCAACAACTCAAAGGAGTGTCTTTGAAGATCCAATTATTCACAGCAGTGGCACCAAAGCAATCAATGTTCCAAGACATTTGTGAGCTTGCCCTTGAACATGAAGCTCGTTTAATCATCTTACCTTTCAAAAGTAGAGGTGTTCATACTCATGGAGTCAGAACAGTGTATTCACAAGTCTTAAGGCATGCACCTTGCTCTATTGCAATTCTTGTTGACAAGGGTCTTCTTCTTGAAACCTCCTCAATAGGCAGTTCCTTTTGCCAATTTAAACTCAAACTTGCTGTGTTGTTTCTGGGAGGTGCAGATGCTAGAGAGGCTCTTGTTTATGCAGATAGGATGGTTGCAAACCAAGATGTGTCACTGACAGTGATAAGGTTTCTCTCTCAAAACTGTGAAGGAGACAATGCAATGGAGAAGAAGCTTGATGATGGAATTGTGACTTGGTTCTGGGTGAAGAATGAGATGAATCCAAGAGTGGTGTACAGAGAGGTGGTGGTTGGAAATGGAGAAGAAACAATTGGAGCAATTCTTGATATGAAAGATGGTGATTATGATCTTTTGATAGTGGGAAGGAAACAAGGGATAAACCCTGTTCTTCTTACTGGGTTATCAGAATGGAATGAAAGTGAAGAGTTGGGAACCATAGGAGACTATGTTTCCTCTGAAGATTTTTCAGGCACAGCTTCTGTTTTAGTGGTACAACAACAAATTCTAAGAGGATAG 2433 0.4044 MVFRKLPCMTRLFPAYRFPQTPNNGWHHHHFVPFRVLKENMVNGSTTSLPVVCNAAEEFHHSNIFNGDNPLAHSFQLIMFNFILVTTITRIVRFLLKPLKQPMLISQIIGGVIVGPSVLGRSKWYQRYMKPEAAQFLANNIGVMGFVFCMFIYGVKLDPALWKKSAGRVHISIALVGMTIPTIAIFVVGLCMRKHLDKELGSVSSIGVIAGFLGITAFPDLFSVLKELNLLNSDIGRKGLSMAMIGDAIGMVTIVAFEAGKQGENGAENALWYMISLVIMIMFVVFCVKPAMVWINNRTLEGHPVDQSLVIVILLGVFVMGFLTDMFGIAIANGPLWLGIAVPDGPGLGATLESKSETIMTDLLMPFSFIMVGSYIDFSSLRATDWSSLEPLFFMVLVGYLTKFFSTWITTFYWRLPLRDGLTLSLIMSLRGQIEIILFVHLMDKKILKVPGFTLLLVMTIVLTATFAPLISMLYDPTRPYMLNQRRNIQHHPPEKELRIVLSILEDETINGPINLLDASNPTTSSPLSVYALRVFELVGHANPLFINHAKQEVPHIYQWTHTINTLESYQQLKGVSLKIQLFTAVAPKQSMFQDICELALEHEARLIILPFKSRGVHTHGVRTVYSQVLRHAPCSIAILVDKGLLLETSSIGSSFCQFKLKLAVLFLGGADAREALVYADRMVANQDVSLTVIRFLSQNCEGDNAMEKKLDDGIVTWFWVKNEMNPRVVYREVVVGNGEETIGAILDMKDGDYDLLIVGRKQGINPVLLTGLSEWNESEELGTIGDYVSSEDFSGTASVLVVQQQILRG* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02326 810 PANTHER CATION/H + ANTIPORTER 56 806 - -
Rops11g02326 810 Gene3D - 76 479 IPR038770 -
Rops11g02326 810 Gene3D - 532 776 - -
Rops11g02326 810 Pfam Sodium/hydrogen exchanger family 83 470 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02326 Rops-Chr11 39135373 39138640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02326 46 807 Antiporter Super Family AT5G37060 41.782 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02326 K26731 - gmx:100783296 1033.09