Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02306 ATGGCAAATCAGAAGACACCCCTCTCCCTTGATATGAAGGAAGTTGTGATAGTTAAACCTTCCAAGCCCACACCCTCTGATGTTCTTTCTCTATCCACCATTGACAATGATCCTAATCTCAACATTCTCTGTGGAACCATTTATGTGTACCAAGCCAATCTTGATTTCCCAAATGACAAACTAGACCCTGCTTATGTGATCAAAGAAGCCCTCTCAAAGGTTTTGGTTTACTATTATCCTCTTGCAGGGAAGATAATAACACTTGATGATGGAAAACTTGGAATCAATTGCAATGCTGATGGAGTTCCATTCTTGGAGGCAACTGCTAACTGTGAACTCTCCTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACAGCACAGAAATTGGTGTTTGATAACCCTTCTCAAGATGAAACTAGTCAACATCCCTTGGTTTTCATGTTGACCAAGTTTCTCTGTGGGGGTTTCACAATTGGAATGGGCTTGTCACACGCTGTTTGTGATGGGTTTGGTGCATCTCAATTCTTCAGAGCCATGGCTGAACTTGCAAGTGGAAAAGATGAGCCCTCAGTGAAACCAGTGTGGGAGAGAGAGAGGCTAATGGGGACAATTCTTATGGAACCACTCCAACTTCCCATAGACAAGACTTCAATGGCAGCTTCACCATTTTTGCCAACTAAGGAGATTTCTCATGAATGCTTTAACTTGAACAGTGAGAGCATACAAAGACTCAAAATGAAACTCATGAAGGAAAGTGACAGTGTGAAGGAAAGCTTCACAATTGTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCATTGAAACTGAGCAATGATGGGGAAACTTTGTTCTGTTTAACAGTGGGGGTGAGACACCTATTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGCTTCATATGTGGTGCTAACAGTGAAAGAACTTGATGAAAGACCACTCTCAGAGGTTGTGAAGCTCATCAAAGAGAGAAAAAAGCTTCCTTCTAATACTGAATATATCAAAAACTCAATCAACATGTTGGAAACAATGAGGAAAATGAACATTAGGATGGAGGGAACAGGTGCATCTATGGTATTAACAGATTGGAGGCAACTTGGTTTGTTGAAAGAAGTTGATTTTGGATGGAAGGCTTCAGTGAATATAATACCAGTCCCATGGAACATGTTTGGATATGTGGATTTGTGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTTAGGGTCTTTGTATCCCTCCCCAAAGCTTCCATGCCCAAGTTCAAAGAGGAGATGGAGGCCCTCAAGCTCATGAAAGGTGATGAGGGTAGCACCTAG 1374 0.4221 MANQKTPLSLDMKEVVIVKPSKPTPSDVLSLSTIDNDPNLNILCGTIYVYQANLDFPNDKLDPAYVIKEALSKVLVYYYPLAGKIITLDDGKLGINCNADGVPFLEATANCELSSLHYLEGIDVPTAQKLVFDNPSQDETSQHPLVFMLTKFLCGGFTIGMGLSHAVCDGFGASQFFRAMAELASGKDEPSVKPVWERERLMGTILMEPLQLPIDKTSMAASPFLPTKEISHECFNLNSESIQRLKMKLMKESDSVKESFTIVETLGAYVWRSRARALKLSNDGETLFCLTVGVRHLLDPPLPEGYYGNAFVASYVVLTVKELDERPLSEVVKLIKERKKLPSNTEYIKNSINMLETMRKMNIRMEGTGASMVLTDWRQLGLLKEVDFGWKASVNIIPVPWNMFGYVDLCLFLPPSNLDPSMKGGVRVFVSLPKASMPKFKEEMEALKLMKGDEGST* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02306 457 Pfam Transferase family 10 446 - -
Rops11g02306 457 PANTHER ACYL TRANSFERASE 4 9 446 - -
Rops11g02306 457 Gene3D - 7 208 IPR023213 -
Rops11g02306 457 Gene3D - 225 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02306 Rops-Chr11 38875151 38876524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02306 8 442 Monolignol Biosynthesis Gene Families AT5G48930 26.106 5.12e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02306 K20240 - gmx:100801843 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02306 11 38875151 38876524 Rops11g02306 11 38875151 38876524 ECH