Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02302 ATGCCTTCTACTACTCTTCAATGGCTAAGCCTTGTGGGCATCATTTGGCTCCAAGCCATAAATGGGACAAACACCAATTTTCCTGCTTACTCTTCCCAGCTGAAGGAGCTTCTTTCCATTTCCCAAGTGCAGCTCAATAACCTTGCTTTTGCCTCTGATGCAGGGAAACTTTTTGGCTGGCTTTCTGGCCTTGCTTCTGTTTACCTCCCTCTATGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATAGGCTATGGTGTGCAATATCTCTTCATCACCAACCAAATTTCCTCTTTGTCCTATTGGCATGTCTTTTTACTAACTTTTCTGGCTGGGAATAGCATTTGTTGGATCAACACAGTCTGCTATGTTGTCACTATAAGGAACTTCCTATCTGATAGCCAAGTTGCTGTGGGATTAACCACCAGTTACCAAGGATTAAGTGCAAAGATTTATACCAATATTGTTGATGCTATTTCTCCACACAAGCAAGCTAGAACCTTTCTCTTACTTAACTCTCTCATACCTGTGGTAGTTGGCATAATAGCAGCTCCTCTAGTGAGAGAAATTGAAGTGACAAGTCCTAAGCACACAGGTGTTGGGTTTGCTGTGATGTTTGTTATCACAATTGGCACCGGACTATATGCTGTGATGACCAGCTTGCAATTGGTCACAAGCAAAATATCTTCATTGGGTATCCTGATAGGTATTCTAGTGTCCCTTATGTTCCCTCTATTAGTCCCAATTTCAGTGAAAATCAAGGAACTAGAAGGATCATGGCACAAAAATAGAGAAAGACTAAGAGTCTACCATTTTACTATTGAGGAGAATACTAATGAAGAGAGGGGAGAGAATGAGGTCAAAGAGGGTGAAAACAACAGAGAAGTTCAAGAAGTTGGTGTGATGGAGGAAATTGGAGTGAAATTAATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCAACAATAGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCCGGGGTTTCTCTGGCACTTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGGTTCTTTGGTCGTCTCATGCCATCTCTTATGGACTATTTCTACAGGCGGAAACGTACAATTTCAAGACCTGCCTCTATGATGGCAGTGATGGCTCCAACAGCAGGTGCATTCTTCTTACTTCTCAACAAAACTGACCTGGCCCTTTACATCAGCACTGCCATAATTGGTGTGTGTACTGGAGCAATAACTTCCATGGCTGTTTCCACAACCACTGAACTATTTGGCACCAAGCATTTCTCTGTGAACCATAATGTGGTTGTGACCAACATTCCCATGGGGTCATTTTTGTTTGGTTACTCAGCTGCACTTATTTACCGTAAGGAAGCGCATGAAGATGGGAAATGCATGGACATGGAATGCTATAGTAACACTTTTATCATCTGGGGCTCCTTTTGTTCCCTTGGAACTTTCTTGGCTTTCATTCTACATGCTAGGACTCGCAAGTTTTACTCACAAAAACAATAG 1548 0.4141 MPSTTLQWLSLVGIIWLQAINGTNTNFPAYSSQLKELLSISQVQLNNLAFASDAGKLFGWLSGLASVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSDSQVAVGLTTSYQGLSAKIYTNIVDAISPHKQARTFLLLNSLIPVVVGIIAAPLVREIEVTSPKHTGVGFAVMFVITIGTGLYAVMTSLQLVTSKISSLGILIGILVSLMFPLLVPISVKIKELEGSWHKNRERLRVYHFTIEENTNEERGENEVKEGENNREVQEVGVMEEIGVKLMLRRIDFWLYFFVYFFGATIGLVFLNNLGQIAESRGFSGTSSLVSLSSSFGFFGRLMPSLMDYFYRRKRTISRPASMMAVMAPTAGAFFLLLNKTDLALYISTAIIGVCTGAITSMAVSTTTELFGTKHFSVNHNVVVTNIPMGSFLFGYSAALIYRKEAHEDGKCMDMECYSNTFIIWGSFCSLGTFLAFILHARTRKFYSQKQ* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02302 515 SUPERFAMILY MFS general substrate transporter 22 248 IPR036259 -
Rops11g02302 515 Gene3D MFS general substrate transporter like domains 191 507 IPR036259 -
Rops11g02302 515 Pfam Nodulin-like 7 250 IPR010658 -
Rops11g02302 515 CDD MFS_Mch1p_like 6 497 - -
Rops11g02302 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 512 - -
Rops11g02302 515 SUPERFAMILY MFS general substrate transporter 195 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02302 Rops-Chr11 38847045 38849042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02302 1 514 Nodulin-like Gene Family AT2G30300 49.714 1.67e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02302 - - gmx:100800763 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02302 11 38847045 38849042 Rops11g02302 11 38847045 38849042 ECH
Rops11g02302 11 38847045 38849042 Rops9g01178 9 19355045 19357172 PCT