Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02295 ATGTCTTCTACTGTTTTACAATGGCTAAGCCTTGTAGGTGTCATTTGGCTCCAAGCTATAAATGGGACAAACACAAATTTCCCTGCTTACTCTTCACAGTTGAAGCAGCTTCTTTCCATTTCCCAAGTGCAGCTCAATAACATTGCTTTTGCATCAGATGCTGGTAAACTTTTTGGCTGGTTTTCTGGCCTTGCTTCTGTTTACTTCCCTCTATGGCTTGTCCTCATGATTGGTTCAACTCTTGGGTTAATTGGTTATGGTATTCAATATCTCTTCATCACCAACAAAATTTCTTCTCTGTCCTATTGGCATGTCTTGTTACTAACTTTTCTGGCGGGGAATAGCATTTGTTGGATTAACACTGTCTGCTATGTTGTCGCTATAAGGAACTTTCTATCTGATGGACAAGTTGCTGTGGGATTAACAACTAGTTACCAAGGATTAAGTGCAAAGATTTACACCAATATTGTTGATGCTGTTTCACCAAATAAGAAAGCTAGAACATTTCTCTTCCTAAACTCTGTCATACCTGCTATAGTTGGCCTAATAGCAGCTCCTCTAGCTAAAGAAATTGAAGTGACGAGTGATAAGAACACGGGTTTTGGGTTTGGTGTGATGTTTGTTATTACAATTGCCACTGGAATATATGCTGTGATGAGCAGCTTGCAATTTGTGACAAACAAAATTTCCTCACTGGGTATCCTGATTGGTATTCTAGTATCTCTTATCTTACCTCTAATACTCCCAGTTTCTGTGAAGATCAAGGAACTAGTTGAATCTTGGAACACAAATAGAGAAAGACTAAGAGTCTACGTGGAGGAGAAAAATAATGAAGACAGGACAGAGAATGAGGACAAAGAAAGTGAAGATAGCATAGAAGTTCAAGAGGTGGGAGTTAGAGAAGAAATTGGAGTGAAGTTGATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTCTACCTTTTTGGAGCAACAATTGGTTTAGTGTTTCTTAATAATTTGGGACAAATAGCTGAATCCAGGGGTTTCTCTAATACTTCATCTTTAGTGTCCTTGTCTTCATCTTTTGGGTTTTTTGGCCGTCTCATTCCATCTCTTTTGGACTATTTTTACAGGGGAAAGCATACAATTTCAAGACCTGCTTTAATTGTGGCACTGATGGCCCCAACTTCAGGTGCATTTTTCTTACTTCTCAACAAAACTGATTATGCCCTTTATGTTAGCACTGCAGTTATTGGAGTGTGTACTGGAGCAATTACTTCTATTGCTGTTTCCACAACAACTGAGTTATTTGGCACCAAACATTTCTCTGTGAACCATAATGTGGTCGTGGCTAACATTCCCATGGGGTCCTTTTTGTTTGGCTACTCAGCTTCACTTATTTACCGTAAGGAAGGGAATGAAGATGGGAAATGCATTGGCATGGAATGCTACAGAATCACTTTTATCATCTGGGGTTCCTTTTGTTTCCTTGGAACTTTCTTGGCTTTGATTTTACATGCAAGGACTCGCAAGTTTTACTCACATAAACAATAG 1539 0.3886 MSSTVLQWLSLVGVIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNIAFASDAGKLFGWFSGLASVYFPLWLVLMIGSTLGLIGYGIQYLFITNKISSLSYWHVLLLTFLAGNSICWINTVCYVVAIRNFLSDGQVAVGLTTSYQGLSAKIYTNIVDAVSPNKKARTFLFLNSVIPAIVGLIAAPLAKEIEVTSDKNTGFGFGVMFVITIATGIYAVMSSLQFVTNKISSLGILIGILVSLILPLILPVSVKIKELVESWNTNRERLRVYVEEKNNEDRTENEDKESEDSIEVQEVGVREEIGVKLMLRRIDFWLYFFVYLFGATIGLVFLNNLGQIAESRGFSNTSSLVSLSSSFGFFGRLIPSLLDYFYRGKHTISRPALIVALMAPTSGAFFLLLNKTDYALYVSTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPMGSFLFGYSASLIYRKEGNEDGKCIGMECYRITFIIWGSFCFLGTFLALILHARTRKFYSHKQ* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02295 512 Gene3D MFS general substrate transporter like domains 3 504 IPR036259 -
Rops11g02295 512 Pfam Nodulin-like 7 250 IPR010658 -
Rops11g02295 512 CDD MFS_Mch1p_like 6 494 - -
Rops11g02295 512 SUPERFAMILY MFS general substrate transporter 7 506 IPR036259 -
Rops11g02295 512 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02295 Rops-Chr11 38669264 38671378 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02295 1 511 Nodulin-like Gene Family AT2G30300 48.023 8.97e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02295 - - gmx:100800763 754.207