Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02293 ATGATGGTGTCTCATCTCCAATATCTGCTTGTGATTGTTCTAGTCACTTTGGCCTCATTGATGATCCCTTCCCACGCATTGCTCACTCCTTATTTCTATGAGAATGTTTGTCCACAGGCACTGCCAGTCATAAGATCAGTTGTTCAACGAGCAATTATTCGTGAACCACGCAATGGGGCATTCTTGCTGCGTTTGCATTTTCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTTCTGCTAGATGACACCAGGAACTTCACTGGCGAGAAGACAGCCCTACCAAATTTCAATTCATTAAGAGGTTTCGATGTATTTTATGAGATTAAAGCAGCAGTTGACAAAGCTTGCAAACAACCTGTTGTATCCTGTGCTGATATCTTAGCTATAGCTGCTCGTGATTCTGTAACCATATTAGGGGCTCCATACTTTTGGTACAAAGTGTTATTAGGCAGAAGAGATGCAAGAACTGCAAGCAAGGATGCTGCAAACACCAATCTTCCTTCCCTTTTTCTCAACTTCTCACAGCTTCTTTCAAATTTCAAGTCTCATGGGTTAAACCTCAAAGACCTAGTGGCACTCTCTGGGGGCCACACCATTGGCTTTTCAAGGTGCACTACCTTTAGAGACAGGATCTACAATGACACCAACATAGAGCAAAGGTTTGCAACCTCTTTGAGGAAAAGATGCCCTCGAAGTGGTGGAGATAACAATTTGGCACCATTGGATTCAACTCCTGCAATGGTTGACACTGTGTATTACAGGGAATTGATGTGTAAAAAGGGTCTCCTCCATTCTGATCAAGAGCTCTTCAAGGGAAATGGTAGTGAAAGTGACAAATTGGTAGAACTATATAGCAAGAACTCATTTGCTTTTGCTCAAGATTTTAAAGCTTCTATGATCAAGATGGGTAACATAAAACCTCTTACTGGGAAGAAAGGAGAGATCAGAAGTAATTGCAGAAAAGTTAATTAA 975 0.4133 MMVSHLQYLLVIVLVTLASLMIPSHALLTPYFYENVCPQALPVIRSVVQRAIIREPRNGAFLLRLHFHDCFVNGCDGSVLLDDTRNFTGEKTALPNFNSLRGFDVFYEIKAAVDKACKQPVVSCADILAIAARDSVTILGAPYFWYKVLLGRRDARTASKDAANTNLPSLFLNFSQLLSNFKSHGLNLKDLVALSGGHTIGFSRCTTFRDRIYNDTNIEQRFATSLRKRCPRSGGDNNLAPLDSTPAMVDTVYYRELMCKKGLLHSDQELFKGNGSESDKLVELYSKNSFAFAQDFKASMIKMGNIKPLTGKKGEIRSNCRKVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02293 324 FunFam Peroxidase 168 303 - -
Rops11g02293 324 SUPERFAMILY Heme-dependent peroxidases 28 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 FunFam Peroxidase 31 176 - -
Rops11g02293 324 CDD secretory_peroxidase 28 323 IPR033905 GO:0004601|GO:0042744
Rops11g02293 324 Gene3D Peroxidase, domain 2 168 303 - -
Rops11g02293 324 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Rops11g02293 324 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Rops11g02293 324 PANTHER PEROXIDASE 72-RELATED 26 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02293 324 Gene3D - 32 321 - -
Rops11g02293 324 Pfam Peroxidase 45 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02293 Rops-Chr11 38561826 38566916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02293 25 324 Peroxidase AT5G05340 57.756 6.74e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02293 K00430 - gmx:100816056 517.694