Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02284 ATGGCATTTTCTTCTTCTCGTTCTTCTTCTTTCTCTTCATCATCAGCCATTGTTGCATTAGCTGTGTTCCTTCTTCTTACAGGAACCTCTTCAGCTACACTCTCTGAGAATTTCTATTCTAAGAAATGTCCTAAGGTTTTTGATACTGTAAAATCTGTTGTTAAAACTGCTGTGGCCAAAGAACGTCGCGTGGGAGCTTCTATTCTTCGCCTCTTCTTCCATGATTGCTTTGTTGATGGTTGTGATGGGTCATTACTACTTGATGACACTTCTTCCTTCAGAGGAGAGAAAACAGCAGCTCCCAACAACAATTCTGTGAGAGGTTTTGAAGTAATTGATGCTATCAAATCTAAGGTGGAGGAAGTATGCCCCGGTGTGGTGTCATGTGCTGATATCTTGGCCATTGCTTCTCGTGACTCTGTTGAGTTGCTTGGAGGGCCATTTTGGAAGGTAAAACTTGGAAGAAGGGATTCAAGGACAGCTAACTTCACTGCTGCCAACACTGGTGTGATTCCACCTCCAACTTCTAACCTCACCAACCTTATCTCAACGTTTAGAGCTCAAGGGCTTTCTGCTAAGGACATGGTTGCCTTATCTGGATCTCACACAATTGGAAAAGCAAGGTGTACTAGTTTCAGAAATCGCATATACAATGAAACCAACATTGCCAGTTCATTTGCAAGGATCAGGCAGAGGAACTGTCCAAGTACTAATGGCACAGGGGACAACAATCTAGCAAATCTAGACTTCAGAACTCCAACCCATTTTGACAACAATTACTACAAGAACCTAATCATCAAAAGGGGACTCCTTCATTCTGATCAAGTGCTCTTCAATGGTGGATCAACTGATTCATTGGTTAGAACTTACAGCCAGAATAGTAATGCCTTTGATGCTGACTTTGTTAAAGCAATGATTAAGATGGGAAACAACAAACCCTTGACTGGGTTAAAAGGGGAGATTAGGAAGAACTGCGGGAGAGTGAATTAG 990 0.4212 MAFSSSRSSSFSSSSAIVALAVFLLLTGTSSATLSENFYSKKCPKVFDTVKSVVKTAVAKERRVGASILRLFFHDCFVDGCDGSLLLDDTSSFRGEKTAAPNNNSVRGFEVIDAIKSKVEEVCPGVVSCADILAIASRDSVELLGGPFWKVKLGRRDSRTANFTAANTGVIPPPTSNLTNLISTFRAQGLSAKDMVALSGSHTIGKARCTSFRNRIYNETNIASSFARIRQRNCPSTNGTGDNNLANLDFRTPTHFDNNYYKNLIIKRGLLHSDQVLFNGGSTDSLVRTYSQNSNAFDADFVKAMIKMGNNKPLTGLKGEIRKNCGRVN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02284 329 Gene3D - 37 329 - -
Rops11g02284 329 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 SUPERFAMILY Heme-dependent peroxidases 34 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Rops11g02284 329 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Rops11g02284 329 ProSiteProfiles Plant heme peroxidase family profile. 33 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 FunFam Peroxidase 37 185 - -
Rops11g02284 329 FunFam Peroxidase 172 308 - -
Rops11g02284 329 PANTHER PEROXIDASE 72-RELATED 31 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02284 329 CDD secretory_peroxidase 34 328 IPR033905 GO:0004601|GO:0042744
Rops11g02284 329 Gene3D Peroxidase, domain 2 172 308 - -
Rops11g02284 329 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02284 Rops-Chr11 38315295 38319032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02284 32 329 Peroxidase AT5G05340 68.456 1.76e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02284 K00430 - gmx:100813384 524.628