Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02279 ATGCAAAGATATGAATTAGGAAGATTACTAGGCCAGGGCACCTTTGGAAAGGTTTACTATGCTCGGAGTGCAATAACTAACCAGAGTGTGGCTATTAAAACGATTGACAAAGATAAGGTTATGAGAACTGGTCAAGCCGATCAAGTCAAGCGTGAAATATCTGTTATGAGATTGGCTAGACATCCCAATGTTATATATCTTTTTGAGGTTATGGCCAACAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGTGAGCTTTTCAACAAGGTGGCCAAAGGAAGACTCAAAGAAGGTGCTGCTCACAAATATTTTAAGCAACTAATCAATGCAGTAGATTTTTGTCACAGTAGAGGCGTGTACCACCGAGACATAAAGCCTGAGAACATTCTATTGGATGAAAATGGGAATTTGAAGGTTTCTGATTTCGGTTTAAGTGCTCTTGCTGAATCCAGGCGGCAGGATGGCTTACTCCATACACCTTGTGGCACCCCTGCCTATGTTGCTCCTGAAGTGATCAAAAGGAAGGGATATGATGGTGCCAAAGCTGATATTTGGTCTTGTGGAATAGTTTTATTTGTCTTGTTGGCAGGTTATCTCCCTTTTCATGACGCAAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTAAAATGCCCTAGTTGGTTCGCACCAGAAGTATGCAATCTATTAGGCCTGATGTTGGATCCAAATCCTGGCACTAGGATTTGCATGGCTAAGATTAGGGAGTTTTGTTGGTTTCAGAAAGGACCAAATGCTAGAAATAAACAACCTGAAGTGGAAAACAACACTGTCTCTTCTTCAGGTACAAGTATTTCTGCTCAAAGTGATGAAAGTGATGGTCTAGCAGCAGGAGCAAAGGAAGAGTCAGTTGTGCCCATAAGTATAAATGCCTTTGACATCATCTCCCGTTCTGCTAGTTTTGATCTTTCGAGATTCTTTGATGACAGTTATCAGAAAAGAGAAGCAAGATTTAGTTCAAGACTGCCTGCATCAGTCATCATCTCCAAGCTGGAAGACATTGCTAAGCAACTGAGGTTGAAAATAAAGAAAAAAGCTGCTGGTTTGTTGAAATTAGAGGGATTCGATGAAGGTAGGAAGGGTGTTTTATCCATTGATGCAGAGATCTTTGAGGTTACTCCTCATTTCCATTTGGTGGAGGTGAAAAAATCAAATGGAGATACATTGGAATATCAGAAAATATTGAAAGAGGATATAAGGCCTGCTCTTCAGGATATTGTTTGGGTCTGGCAAAGTGACCAACAACTGCAACCACATCAGTCAGAGCAACAGCTACAAATACATGACCAACAGCAACAACAACCACAGTCATAA 1368 0.4028 MQRYELGRLLGQGTFGKVYYARSAITNQSVAIKTIDKDKVMRTGQADQVKREISVMRLARHPNVIYLFEVMANKSKIYFVMEYAKGGELFNKVAKGRLKEGAAHKYFKQLINAVDFCHSRGVYHRDIKPENILLDENGNLKVSDFGLSALAESRRQDGLLHTPCGTPAYVAPEVIKRKGYDGAKADIWSCGIVLFVLLAGYLPFHDANLIEMYRKISKAELKCPSWFAPEVCNLLGLMLDPNPGTRICMAKIREFCWFQKGPNARNKQPEVENNTVSSSGTSISAQSDESDGLAAGAKEESVVPISINAFDIISRSASFDLSRFFDDSYQKREARFSSRLPASVIISKLEDIAKQLRLKIKKKAAGLLKLEGFDEGRKGVLSIDAEIFEVTPHFHLVEVKKSNGDTLEYQKILKEDIRPALQDIVWVWQSDQQLQPHQSEQQLQIHDQQQQQPQS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02279 455 CDD CIPK_C 308 422 - -
Rops11g02279 455 FunFam Non-specific serine/threonine protein kinase 84 265 - -
Rops11g02279 455 FunFam Non-specific serine/threonine protein kinase 1 83 - -
Rops11g02279 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Rops11g02279 455 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Rops11g02279 455 Gene3D Kinase associated domain 1, KA1 310 427 - -
Rops11g02279 455 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02279 455 Pfam Protein kinase domain 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02279 455 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02279 455 MobiDBLite consensus disorder prediction 266 289 - -
Rops11g02279 455 FunFam Non-specific serine/threonine protein kinase 302 426 - -
Rops11g02279 455 Pfam NAF domain 304 362 IPR004041 GO:0007165
Rops11g02279 455 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Rops11g02279 455 SUPERFAMILY Protein kinase-like (PK-like) 2 283 IPR011009 -
Rops11g02279 455 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Rops11g02279 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 421 - -
Rops11g02279 455 MobiDBLite consensus disorder prediction 265 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02279 Rops-Chr11 38284614 38287626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02279 3 432 CBL-interacting serine-threonine protein kinases AT5G58380 66.290 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops11g02279 Pkinase 7.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02279 - - gmx:100790905 726.472