Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02275 ATGCCGGAGATCGAACATGCGGCTGCGGAGGTAAACACCGCTCTGTTCGGAAAATACGAACTTGGAAGGGTAATCGGTTGCGGCGCGTTCGCTAAAGTTTACTACGCACGCAATTTACAAACGGGTCAAAGCGTGGCGGTGAAAATCATCAACAAGAAGAAACTGGCCGGAACAGGACTCGACGGAAACGTGAAACGCGAAATCAGCATCATGAGTCGTCTCCACCACCCTTCCATCGTGCGTCTCCACGAAGTTCTCGCAACGAAAACGAAAATCTTCTTCGTAATGGATTTCATTCGTGGTGGCGAACTCTTCGCAAAAATCTCAAAGGGTCGTTTCGCTGAAGATCTAAGCCGACGATATTTTCACCAATTAATCGCCGCCGTAGGGTACTGCCACTCACGCGGCGTTTTCCATCGTGATCTTAAACCGGAGAATCTTCTTCTCGATGAGAATGGTGATTTAAAGGTTTCGGATTTCGGGTTAAGTGCTGTTAGGGATCAGATCCGAATCGATGGGTTGCTCCACACACTTTGTGGGACTCCTGCTTACGTGGCACCGGAGATTCTAGCTAAGAAGGGTTACGACGGTGCAAAGGTTGATGTTTGGTCATGCGGCGTCGTTTTGTTCGTTCTTGCTGCTGGGTACTTACCCTTCAATGACCCGAATTTGATGGTTATGTATAGGAAGATTTACAAGGGTGAATTTCGGTGTCCACGGTGGATGTCGCCGGAGCTCCGGCGTTTTTTGTCTAAGTTACTTGATACCAACCCAGAAACTCGGATCACCGTTGATGGTATGACCCGGGACCCGTGGTTTAGAAAAGGGTATAAAGAGATAAAATTTCATGATGAGGATTATGGGTCCGGGTTGAAGGGTAATGGGTCGGAGGTGTTGGATTTGAATGCTTTTGATATTATATGTTTTTCTTCGGGTTTGGATCTATCTGGGTTGTTCGGGCAATCGGGTGAGGGAGAGAGGTTGGTTTTGAAGGAGTCGCCGGAGAAGATTGTGGAGGCAGCGGAAGAGGTGGGGAAGGCGGAGAGGATGGCGGTGAGGTGGAAGAAGGAGTGTGGGGTGGAGTTGGAAGGGGTAAAGGGTAATTTCGGAATTGGGGTTGAGGTTTCCCGGTTGACGGCGGAGCTTGTGGTGGTTGAGGTTAGAAAAAGAGGCAGCGACGCCGTGGCTTTTAAGAACTTGTGGCAGGAGAAGCTCAAGCCTCGGCTACTAGGTGGTGCAACGACGTCGTATCATCATGATGAGGAACCGGAGTCTCCGGTTGCCGGTGACTAA 1293 0.4981 MPEIEHAAAEVNTALFGKYELGRVIGCGAFAKVYYARNLQTGQSVAVKIINKKKLAGTGLDGNVKREISIMSRLHHPSIVRLHEVLATKTKIFFVMDFIRGGELFAKISKGRFAEDLSRRYFHQLIAAVGYCHSRGVFHRDLKPENLLLDENGDLKVSDFGLSAVRDQIRIDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYRKIYKGEFRCPRWMSPELRRFLSKLLDTNPETRITVDGMTRDPWFRKGYKEIKFHDEDYGSGLKGNGSEVLDLNAFDIICFSSGLDLSGLFGQSGEGERLVLKESPEKIVEAAEEVGKAERMAVRWKKECGVELEGVKGNFGIGVEVSRLTAELVVVEVRKRGSDAVAFKNLWQEKLKPRLLGGATTSYHHDEEPESPVAGD* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02275 430 SUPERFAMILY Protein kinase-like (PK-like) 16 281 IPR011009 -
Rops11g02275 430 MobiDBLite consensus disorder prediction 411 430 - -
Rops11g02275 430 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02275 430 FunFam Non-specific serine/threonine protein kinase 10 98 - -
Rops11g02275 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Rops11g02275 430 CDD CIPK_C 302 407 - -
Rops11g02275 430 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Rops11g02275 430 Pfam NAF domain 301 353 IPR004041 GO:0007165
Rops11g02275 430 FunFam Non-specific serine/threonine protein kinase 9 298 - -
Rops11g02275 430 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 393 - -
Rops11g02275 430 Gene3D Kinase associated domain 1, KA1 297 411 - -
Rops11g02275 430 Gene3D Transferase(Phosphotransferase) domain 1 9 295 - -
Rops11g02275 430 SMART serkin_6 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02275 430 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Rops11g02275 430 ProSiteProfiles Protein kinase domain profile. 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02275 430 MobiDBLite consensus disorder prediction 415 430 - -
Rops11g02275 430 Coils Coil 337 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02275 Rops-Chr11 38259589 38261524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02275 1 410 CBL-interacting serine-threonine protein kinases AT2G30360 65.403 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops11g02275 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02275 - - gmx:100799169 717.227