Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02272 ATGGGTAACAACAGGTTCAAATTTTCAGATATGATACCAAATGCATGGTTTTACAAGCTCAAAGATATGAGCAGATCAAGGAAGAGAAATGGCTCTCATGTTATGAAGAACAAAGTAACCTCTCCAACAACAACAGAAAGGTCACAGCCAAGATACTCTCATTATTACTCCATTGAACCAAACGGAGCTGGTAAGTTATACAACTCTACTATTTACACCAAACACTCAGACATCTCATTCACTGATTCACCAAGAAGGTCATCCAAGAGAAGAACCAAGAGAAAAACCATTTATAAGCCTTCTCCTACAGCTGTCTCCTCCCCAGTCATTGACATTTATAGTTGTCATTCCACAAATAATTGGATTAAGCCAAATCAAACTTATACTCCTGATTCTTATGTCTCCTCCATAGAGAGTTCTTCTGAATCAAACCTCCATGAATATGTTTCATCTGAGTCTGAGTGTGATAAGTTTACTGTTCCTGACTTGTTTAATGGGCTACCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACAAATGACATTATCATTGACATGAAAAATGAACCCTTCACTGGAAATTCTGAAAATCTTGATGGGTTTGATACAATTTCACAGTTAGGTCTTCCTCCAATATTAACAAAGCCAGTGAGGTTTGATGATAAGGTCATTGAAGCCACTGAGTTTAGAAGATCAGCCAAACTCGATGAGCTAAAGGCTCATAAGTCTCTATCTGTCAAAATTAGCAAAGAGGAAAGTAGTAGAACCAAGAGAGAGAGAAAAACTAGTCCAGTATCTAGAATCTCCTCTGCTAATTCTACAGGCATAAGGCTTAGAGTCAATTCTCCAAAACTTGCAAGTAGGAAAGTTCAAGCCTATGCAAGAAGGAGTGTATCATCCAGTGCAAGCAAAGCCTCACAAAATTCAGATTTTCCAAAGGGCTTTGCAGTTGTCAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAATCTATGGTGGAGATGATTATGGAGAACAATATCCGGGCATCAAAAGATTTGGAGAACCTACTCGCCTGCTATCTTTCACTGAATTCAAGTGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGATATGGCTCAACTTAAATTGTAA 1149 0.3847 MGNNRFKFSDMIPNAWFYKLKDMSRSRKRNGSHVMKNKVTSPTTTERSQPRYSHYYSIEPNGAGKLYNSTIYTKHSDISFTDSPRRSSKRRTKRKTIYKPSPTAVSSPVIDIYSCHSTNNWIKPNQTYTPDSYVSSIESSSESNLHEYVSSESECDKFTVPDLFNGLPSECSCRVSSSTNDIIIDMKNEPFTGNSENLDGFDTISQLGLPPILTKPVRFDDKVIEATEFRRSAKLDELKAHKSLSVKISKEESSRTKRERKTSPVSRISSANSTGIRLRVNSPKLASRKVQAYARRSVSSSASKASQNSDFPKGFAVVKSSLDPQRDFRESMVEMIMENNIRASKDLENLLACYLSLNSSEYHDLIVKAFEQIWYDMAQLKL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02272 382 ProSiteProfiles OVATE domain profile. 317 376 IPR006458 -
Rops11g02272 382 Pfam Transcriptional repressor, ovate 321 377 IPR006458 -
Rops11g02272 382 MobiDBLite consensus disorder prediction 78 101 - -
Rops11g02272 382 MobiDBLite consensus disorder prediction 35 51 - -
Rops11g02272 382 NCBIfam uncharacterized plant-specific domain TIGR01568 315 377 IPR006458 -
Rops11g02272 382 MobiDBLite consensus disorder prediction 246 264 - -
Rops11g02272 382 MobiDBLite consensus disorder prediction 27 51 - -
Rops11g02272 382 MobiDBLite consensus disorder prediction 246 273 - -
Rops11g02272 382 Pfam DNA-binding domain 1 44 IPR025830 GO:0003677
Rops11g02272 382 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 154 377 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02272 Rops-Chr11 38229676 38230824 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops11g02272 Ovate 9.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02272 - - gmx:100798120 616.305