Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02270 ATGTATCCCAATAAAAAGGGCAACGAGGATGACAAAGCTGAGCATGGTTACATGGAAACTGACCTAACTGGTCGCTATGTCCGGGTTGGAGAAATTCTTGTGAAAATTGGTGACTTGGGTCTAGCAGCAATTCTCCGTGGTTCCCAGCCAGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCACCAGAATTGTATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTAGAAATGCTTACATCTGACTATCCATATAGTGAATGTGCTAACCCTGCACAGATATACAAGAAAGTGACATCGGGAAAGCTACCAGCAGCACTTTTCCGGATTGAAGACACAGAAGCACAGAAATTTATTGGCAAATGCCTAGTACCTACAGCAAAGAGACCGTCAGCAAAAGAATTGTTGCATGATCCATTTCTTGTGTCTGATGATGCATCATCAATGACAAGGATTGAAATTCAGAATCCTTTTTTAAATTACAGCGAGATGGATAAACTTCAATTGAGTAATGATTTACCTAGGACTGCAATGTCAATCACTGGGAAGCTGAATCCCGAGGATGATACCATCTTTCTCAAAGTGAAAATTGCAGACATGGATGGTTCTGCCTAG 639 0.4163 MYPNKKGNEDDKAEHGYMETDLTGRYVRVGEILVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECANPAQIYKKVTSGKLPAALFRIEDTEAQKFIGKCLVPTAKRPSAKELLHDPFLVSDDASSMTRIEIQNPFLNYSEMDKLQLSNDLPRTAMSITGKLNPEDDTIFLKVKIADMDGSA* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02270 212 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 34 209 - -
Rops11g02270 212 Pfam Protein kinase domain 34 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02270 212 SUPERFAMILY Protein kinase-like (PK-like) 33 181 IPR011009 -
Rops11g02270 212 Gene3D Transferase(Phosphotransferase) domain 1 11 157 - -
Rops11g02270 212 SMART serkin_6 12 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02270 212 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02270 Rops-Chr11 38200114 38215197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02270 34 212 MAP Kinase Kinase Kinase AT5G58350 64.641 9.20e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops11g02270 Pkinase 2.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02270 K08867 - gmx:100778102 313.923