Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02262 ATGTATCCCAATAAAAAGGGCAACGAGGATGACAAAGCTGAGCATGGTTACATGGAAACTGACCCAACTGGTCGCTATGTCCGGGTTGGAGAAATTCTTGGTAAAGGGGCAATGAAAACAGTTACAAAGCAATTGATGAGATACAGGAAGAAATATAAGCATGTACGCATAAAAGCAGTAGAGTTGGGCTCGGCAAATCTTATAGGGTCTTTGAAAATTGGTGACTTGGGTCTAGCAGCAATTCTCCGTGGTTCCCAGCCAGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCACCAGAATTGTATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTAGAAATGCTTACATCTGACTATCCATATAGTGAATGTGCTAACCCTGCACAGATATACAAGAAAGTGACATCGGGAAAGCTACCAGCAGCACTTTTCCGGATTGAAGACACAGAAGCACAGAAATTTATTGGCAAATGCCTAGTACCTACAGCAAAGAGACCGTCAGCAAAAGAATTGTTGCATGATCCATTTCTTGTGTCTGATGATGCATCATCAATGACAAGGATTGAAATTCAGAATCCTTTTTTAAATTACAGCGAGATGGATAAACTTCAATTGAGTAATGATTTACCTAGGACTGCAATGTCAATCACTGGGAAGCTGAATCCCGAGGATGATACCATCTTTCTCAAAGTGAAAATTGCAGACATGGATGGTTCTGCCAAGAATGTGTATTTTCCCTTTGACATTCTCACTGACACCCCAATTGATGTTGCAATGGAAATGGTGAAAGAATTGGATATCACAGATTGGGAGCCTTCTAAAATTGCAAATATGATTGAAGGAGAGATATCCATGTTGCTTCCAAACAGGAGGAATAGTAGCTGTTCGTACACCTGCCAAAGATACTTTCAGTAG 942 0.4087 MYPNKKGNEDDKAEHGYMETDPTGRYVRVGEILGKGAMKTVTKQLMRYRKKYKHVRIKAVELGSANLIGSLKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECANPAQIYKKVTSGKLPAALFRIEDTEAQKFIGKCLVPTAKRPSAKELLHDPFLVSDDASSMTRIEIQNPFLNYSEMDKLQLSNDLPRTAMSITGKLNPEDDTIFLKVKIADMDGSAKNVYFPFDILTDTPIDVAMEMVKELDITDWEPSKIANMIEGEISMLLPNRRNSSCSYTCQRYFQ* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02262 313 Gene3D Phosphorylase Kinase; domain 1 11 60 - -
Rops11g02262 313 SMART serkin_6 27 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02262 313 MobiDBLite consensus disorder prediction 1 20 - -
Rops11g02262 313 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02262 313 Pfam Protein kinase domain 69 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02262 313 Gene3D Transferase(Phosphotransferase) domain 1 61 219 - -
Rops11g02262 313 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 69 303 - -
Rops11g02262 313 Gene3D - 226 303 - -
Rops11g02262 313 SUPERFAMILY Protein kinase-like (PK-like) 69 218 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02262 Rops-Chr11 38003076 38007044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02262 1 60 MAP Kinase Kinase Kinase AT3G51630 42.857 1.82e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops11g02262 Pkinase 2.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02262 K08867 - gmx:100778102 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02262 11 38003076 38007044 Rops11g02262 11 38003076 38007044 ECH