Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02261 ATGACTAAACAAGGAGCCTATGGAATTCAGATTGTTGCAATGACACAAGGTGGAGCTTTTGGATGTAGTGGTCGAAATCATCTTTGCAAGATGGAGAGTTGTGTGATGGATTTGGGAAAGACGTTTGTGGAGAAATTGATAAACGGTGCAATAGCAGAGTTAAATTATCTATGTTGCTACACCTGTATTGCTGAAGACTTTGAAAAAGAAAAGAAAGGGTTGGAAGCAGAAAGGAAGACCGTGGGGCAACGTGTTAAAGTGGCAAACAGAAATGCTGAGGATATTCAAATTAATGCTTCATTTTGGGAAGAACAAGCTGATAAGCTCATTCAAGAGGACACCAAAACAAAGAAGACATGTTTTTTTGGATTGTGTCCTAATTGCATATGGCGATATAAAAGAGGAAAGGAACTGATAAAGATGACAAAGGAAATTAGAAAACAAATGAAGGATGCAAAGAATTTTGTCAATGTTGGAGTCCCTTCTCCTGTTCCAGATGTTAGTCGCCACTCTTCCAAAGATTACATTCCATTTGAAAGTAGAGAGTCCAAATATGAAGAACTTTTGGATGCACTCACAAATGACAACTGCTATGTAACTGGATTGCAAGGGATGGGGGGCACCGGACCCCTAGGATTGGAATGGAAAAATTGTACTGAGTCAGAGCGACCAGGAAAATTGTGGAAAAGATTAACCTGTGGTGAGAAAATTCTTTTGATATTGGATGATGTGTGGAGACCTCTCGAACCTCACGATTTAGCAAAAATAGGGATTCCATCTAGCGACAATCGCCAAGGTTGCAGGGTTCTTTTAACCACACGGAAATTACAGGTATGCAACAAAATGGAATGTGGGAGGACAATTGATTTACAGCTTTTACCTGAGGAAGAAGCAAGGATCATGTTCGAAAAGCATGTCGGTATAAGCGATAATTTCTCCAGAAGTTTGCGACAAAAGGGGCATGAAATTGTAAAGGAATGTAAAGGATTACCGGTTGCAATTGAAATTATCGCTAGCAGTTTAAAGGGTCAACTGGGTCACGAAGAGTGGGAACAGGCCTTAAAATCCTTGCGGGAACCTTTGCCCAAGAATCTAAAGGACGCTGAAGAAAGTTTGGTTGCAATTTATAATAGTTTGAAGTATAGTTATGATTATATGAAGAATGAAAAGGCCAAGGAACTGTTCCTCTTATGTTCTGTGTTCCGAGAAGATGAACAGATTTCTACTGAAATTTTAACCAGGTGTGGCATAGGAGTGGGCCTTCTTGGGGAAGATTATGATAAATACAATGATGCTAGAAGGGATGTAGTTGTGGCTAAAAATGAACTCGTAGATTCTTGTTTGTTGTTGAAGGATGAGGAAGGGAGTGTGAAAATGCACGACTTGGTACGTGATGCAGCCCAATGGATAGCGAATGGATGGATTCAAACAGTAAATCTGTCTGATAGCAAAAGTCGAAAGTCATTGGTTGAAAGTGGGAAAACTAAATATTTGTTATGCCACGGTAAAAGCATGGATGTGTTTTCCATGGGTCTTGATGGTTCTGAACTTGAGATTCTAATTGTGTCCATTGATGAAACCAACTCTATGGAAATCCCAAATTCATTCTTCCAAAACATGACAAGGCTTCGTGTGTTCCATTTATTAAATAACACCTGGAGGAGAGGGGAAATGCAGTCGCCTCAATTTTTACCTCAATCAATTGAATCATTAACGAACATTCGATCTCTATTGCTTGAAGGCTTCAAATTAGGTGACATGTCCATTATTGGAAATCTGCGAAGTCTTGAAACTCTTGATTTGATTTGTTGTTCAAATGTTGAGGTTCCAGGTGAAATTGCGAAACTGGAGAAGCTTAGAGTATTGAACTTGGTTTATTGTGAATTTACGAGTGAATCAGAAGCAACATTCAAGAGTCTGGTTCAAACAGCAGAGATTCTTGGGTTAGAAGAAATTCAAGGGGGACAGAGAAATCTCATGCCTGAGATCGTTCCAATAGATAAAGGTATGAATGATCTAAAAGAGCTTTATTTGACATCTTGTTCACGACTACAATGCCTCATTGGCAATAATTCTCCCGAACAGAAGGTCTTCACCCAATTGGTTGTATTAGAACTTGAAAAAATGGGAAATTTGAAAGAACTATGCAATGGGCCCTTTCCCTCTGACTTTCTTAAGAATTTAGAGAGGCTAACTATCAAAGACTGTAATTTTCTTGGGCTAAAGGAAATTCAAGGGGGACAGAGAAATCTCATGCCTGCGATCGTTCCAATAGATAAAGGTATGAATGATTTGAAAGAGCTTTATTTGACATCTTGTTCACAACTACAATGCCTCATCGAAACTCATTCTCACGAACAGAAGGTCTTCGACAAGTTGGTTGTATTAGAACTTGAAAAAATGGGAAATTTGAAAGAACTATGCAATGGGCCCTTTCCCTCTGACTTTCTTAAGAATTTAGAGAGGCTAACTATCAAAGACTGTAATTTTCTTGGGCTAAAGGAAATTCAAGGGGGACAGAGAAATCTCATGCCTGCGATCGTTCCAATAGATAAAGGTATGAATGATTTGAAAGAGCTTTATTTGACATCTTGTTCACAACTACAATGCCTCATCGAAACTCATTCTCACAAACAGAAGGTCTTCGACAAGTTGGTTGTATTAGAACTTGAAGTAATGGGAAATTTGAAAGAACTATGCAATGGGCCCCTTCCCTCTGACTTTCTTAAGAGTTTAGAGAGGCTAATTATTAAGTACTGTATACATTTGAGAAGCATGTTGTTTATGAGCAAGCTAAACCTCTCCAGTCTTAAAACCATCGAACTGTGGGAATGTCAGGAGTTGGTATCCCTATTTCAACTATCGACTTCTCGAAGCCTAAAGTTGTTGGAGGTATTGGATATATGTTACTGTGAGAAATTGGAAAACATAATAATAGATGATGATGGTGAAGAAATAGCTAACAGAGATAACAAGAGTCGTGGCTCAGTGTTTCCAAATTTGAAAACTCTTAAAATCAGATCATGTCCCCAATTAAAAGTCATACTTCCATTCCATTCTGCTCTGGACGTTCCAGTACTTGAACATATCGATATATTCCAATGTAGTGAGCTGAAGTATATCTTTGGGCAATACCAGCATAAACATGACAAAGATTTGCATCAAGAGGTAAAGGATGTCCTACTTGGTTCTCTGAAAGTAATGCAGCTCTGGAACTTGCCAAATTTCATCGACATTTTCCCAGAATGTGATCATCCTATGTGCTCATCCATGAAAAGGTCGTCTTCCAAAGATGGGTCCAAGGCACAATTACAATCAGACCCCATCAAATGCAATATATTTCCTTGGAAATATAGACACAAATTGAGGAGTACCACAAGTACTAAAATACCATTGGATCAACCGCAAGACTGCTCAATCCCATCGGCACCAGACTTACACTGTCCACATCTTCGGGAACCTACTCAATGTCTTTTCAAACAATCAAACATCCTGAGCAATATTACATCGATTACGCTTTGGAGAGTTTCGAAGATAAAATCGGTGTTTACCCTGCCTATTGCTCAAACAATGTTGTTGGAAAGATTGACGATTGAAAATTGTGAAGAATTGAAGTACATAATATCAGGAAGTGGTGGTTGTGGTGGCAATAACGGGAAAGATGTCTTCCCAAAGTTAGAAAAGCTCTCCGTGGGAAATTGTAAGCAATTGGAATATATATTTGAACACTACTCTCATGATCTTCAAAACCACAGCAAGATGCATCGTCATCTTCCAGCATTGAATAGTCTCTGTCTAGACAATCTGCCCAATTTCATCGGCATGTGTCCTGAAAACTATTCCGCAACATTACCACCATTGACAGAATTTGAACTCAAGAAATGTGCCAAGTTTGCAATTAAATCCATTGGTCATTTCATCAATCATTTGTATTCAAGACATATTGAGGATTTGAGTGGGAATGTGAAGAATTTTCTCATTCTGGAAAATCTCAAAGTGTATAACTCCAAAGCAGAAAATATTTTTTGTCTCGATGAAATGATTGGACAGCAAATGAACTTTGGATTACAAAAGATTCATTTGGGTGATATGCCTCAGATGACATATCTTTTTATGGATCCCAAAAATTCTTTTGTCCTCCAAAACCTTAAAAAGATAAAGGTTGTGCGATGTGAAAAATTGGAAGTAATCTTTCCTGCTTCTATTTCAAGAAGTCTACCACGGTTGCATTATCTAATAATACGAGAATGCAAAGAATTGAATCAAATCATTGAAGAGGAAGTGGAGGATCAAAAAATGTCAAATTGTCATTCTCCAAAGACATGCTTCCCAGAGCTACAAACACTTGAAGTCCAAAATTGCAGTAAGTTGAAGTGTGTGTTTCCTACCTCCATAAGTAAAGAGCTTCCCAAGCTAAAAGTTCTGATGATAAAAGGAGCAGATGAGTTAAAGGAAGTATTCGGAGGTGAAGGTGATCAAAAAGTTGAGATTCCAAATCTAATATTTGTAGCATTCGTTGAACTTCCAAGCCTCTGCCAAGGGATTCAATTTCAGAATGTAGTCCATCGTTTGGTGCTTAATTGTCCAAAACTCTCATTGACTTCAGCAATAACTCCCGACAGCTTCAAAATATTTGGATATTCTTACAAAGAAATTATTATGAAGGAGCATTTGTTCGATCTATACAATCAGTATACACACATGATTAATAATGAAAATCGAATTGTCGAAACTACTGAAGATCAAGCAGCATTGGGACGTGATTTGATTTCTTCACAGGTCAATGCCAATCATTCTATTCAAGCTAACTCAGCTGAATACAATCAACAAGAAAATGACATTGAATCAAACAAGTCAATTTTTGTGGAGACAACAACAGAACAGACACCAGAGGCAGAGCAAGAATTTGTTGAAAATGTTCCTAGTTTAGAGATACCATCAATATCAAATTTTTCACCAACAAATTCAGAAGTAATTAGAGAGGAGCCATGTCCAAGTCCCTTAGAAATTCCTCCTCATAAAACACATTCACATGAGTTGTTAGATCAACAATCAATGGGTGAACCATGTTTGATGGACCAACAACAACCACTTAGAGAAGTTGATATTACCTTTAAAATTCGTCAGGAAAATAATAATCTAAATGAAACAGAGGACCAAAATATTCAAGAGGATTCTAAGTCAAAGGAAATTGCTACAACAATTATGTCCGTTGATTCAGAAACTAGAAATGTGCTACCTATACCATTACATGCTCCTCAGCAAAAGGATATTAAAATAAATGTTGAGGAAGGAACTACATCAACTAATATCAAGATACCTACCTCATCAACTCATTTAGAATCAGTTAGTTTACAAGAAGATGGTGATAGCAAAATAACCACACCTTCCTTTTTAACTATCAATATAGACTCTCAGGAAACTGCTAAGACTCAAGCTTCAGGAGCTTCAAAATCCAAGCTCTCTCATTGCATCCCTTCTCTTGATGCACCTCCTTCAATGCCATTTAAAGGGAACTCTTCTCAAATTGTGGAGGATTTTGCTTCTATCATCAAAAGTGAGCTTGGGCAGCTGGTTACCAAGAAACATTTGGCTTTTGAGAACTTGTCATTGTTGACTGATTTTCTTATGAAGCATCCTTCTGTTCGTTTAACAAACAACTCATTTAGTAATAGATACAAGGGTTATGCCTACAACTGCCTAGCTGAGCTATTGAAATTCCTCCAAACCCATAGTGTGTTGGACATGTTAGGGTCAAGCCACTCTGATTTTGTGGAGTTATTACAAGATGTGCGCAGATTTGATTTTGACAAGGATTGGTTGGATGGTGTTGAAAAACGTGCCTTGTTTCCTGGTTTACAAGTCTCTGAAGATACATTGCAAAAGTTGTTGGACTCAAAGCGCATTTTGACTCAACATGTGGAGGATCTTAAGCATCAATTGGCATCCTCTGAAGCTGTTTTGGAGAGTATCACTCAACAGGAGGCACAAGTTTTAGAAGCTAGGGTTGCTTTGAGCGCCCCTCTTGGTTATTAG 6036 0.3804 MTKQGAYGIQIVAMTQGGAFGCSGRNHLCKMESCVMDLGKTFVEKLINGAIAELNYLCCYTCIAEDFEKEKKGLEAERKTVGQRVKVANRNAEDIQINASFWEEQADKLIQEDTKTKKTCFFGLCPNCIWRYKRGKELIKMTKEIRKQMKDAKNFVNVGVPSPVPDVSRHSSKDYIPFESRESKYEELLDALTNDNCYVTGLQGMGGTGPLGLEWKNCTESERPGKLWKRLTCGEKILLILDDVWRPLEPHDLAKIGIPSSDNRQGCRVLLTTRKLQVCNKMECGRTIDLQLLPEEEARIMFEKHVGISDNFSRSLRQKGHEIVKECKGLPVAIEIIASSLKGQLGHEEWEQALKSLREPLPKNLKDAEESLVAIYNSLKYSYDYMKNEKAKELFLLCSVFREDEQISTEILTRCGIGVGLLGEDYDKYNDARRDVVVAKNELVDSCLLLKDEEGSVKMHDLVRDAAQWIANGWIQTVNLSDSKSRKSLVESGKTKYLLCHGKSMDVFSMGLDGSELEILIVSIDETNSMEIPNSFFQNMTRLRVFHLLNNTWRRGEMQSPQFLPQSIESLTNIRSLLLEGFKLGDMSIIGNLRSLETLDLICCSNVEVPGEIAKLEKLRVLNLVYCEFTSESEATFKSLVQTAEILGLEEIQGGQRNLMPEIVPIDKGMNDLKELYLTSCSRLQCLIGNNSPEQKVFTQLVVLELEKMGNLKELCNGPFPSDFLKNLERLTIKDCNFLGLKEIQGGQRNLMPAIVPIDKGMNDLKELYLTSCSQLQCLIETHSHEQKVFDKLVVLELEKMGNLKELCNGPFPSDFLKNLERLTIKDCNFLGLKEIQGGQRNLMPAIVPIDKGMNDLKELYLTSCSQLQCLIETHSHKQKVFDKLVVLELEVMGNLKELCNGPLPSDFLKSLERLIIKYCIHLRSMLFMSKLNLSSLKTIELWECQELVSLFQLSTSRSLKLLEVLDICYCEKLENIIIDDDGEEIANRDNKSRGSVFPNLKTLKIRSCPQLKVILPFHSALDVPVLEHIDIFQCSELKYIFGQYQHKHDKDLHQEVKDVLLGSLKVMQLWNLPNFIDIFPECDHPMCSSMKRSSSKDGSKAQLQSDPIKCNIFPWKYRHKLRSTTSTKIPLDQPQDCSIPSAPDLHCPHLREPTQCLFKQSNILSNITSITLWRVSKIKSVFTLPIAQTMLLERLTIENCEELKYIISGSGGCGGNNGKDVFPKLEKLSVGNCKQLEYIFEHYSHDLQNHSKMHRHLPALNSLCLDNLPNFIGMCPENYSATLPPLTEFELKKCAKFAIKSIGHFINHLYSRHIEDLSGNVKNFLILENLKVYNSKAENIFCLDEMIGQQMNFGLQKIHLGDMPQMTYLFMDPKNSFVLQNLKKIKVVRCEKLEVIFPASISRSLPRLHYLIIRECKELNQIIEEEVEDQKMSNCHSPKTCFPELQTLEVQNCSKLKCVFPTSISKELPKLKVLMIKGADELKEVFGGEGDQKVEIPNLIFVAFVELPSLCQGIQFQNVVHRLVLNCPKLSLTSAITPDSFKIFGYSYKEIIMKEHLFDLYNQYTHMINNENRIVETTEDQAALGRDLISSQVNANHSIQANSAEYNQQENDIESNKSIFVETTTEQTPEAEQEFVENVPSLEIPSISNFSPTNSEVIREEPCPSPLEIPPHKTHSHELLDQQSMGEPCLMDQQQPLREVDITFKIRQENNNLNETEDQNIQEDSKSKEIATTIMSVDSETRNVLPIPLHAPQQKDIKINVEEGTTSTNIKIPTSSTHLESVSLQEDGDSKITTPSFLTINIDSQETAKTQASGASKSKLSHCIPSLDAPPSMPFKGNSSQIVEDFASIIKSELGQLVTKKHLAFENLSLLTDFLMKHPSVRLTNNSFSNRYKGYAYNCLAELLKFLQTHSVLDMLGSSHSDFVELLQDVRRFDFDKDWLDGVEKRALFPGLQVSEDTLQKLLDSKRILTQHVEDLKHQLASSEAVLESITQQEAQVLEARVALSAPLGY* 2012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02261 2011 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1217 1526 - -
Rops11g02261 2011 Gene3D - 214 288 IPR027417 -
Rops11g02261 2011 Gene3D Ribonuclease Inhibitor 853 1058 IPR032675 -
Rops11g02261 2011 Gene3D Ribonuclease Inhibitor 1284 1494 IPR032675 -
Rops11g02261 2011 SUPERFAMILY L domain-like 762 1074 - -
Rops11g02261 2011 Coils Coil 92 112 - -
Rops11g02261 2011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 398 IPR027417 -
Rops11g02261 2011 SUPERFAMILY RNI-like 1193 1486 - -
Rops11g02261 2011 PRINTS Disease resistance protein signature 591 607 - -
Rops11g02261 2011 PRINTS Disease resistance protein signature 199 214 - -
Rops11g02261 2011 PRINTS Disease resistance protein signature 327 341 - -
Rops11g02261 2011 SUPERFAMILY L domain-like 458 837 - -
Rops11g02261 2011 Coils Coil 64 84 - -
Rops11g02261 2011 Coils Coil 1707 1727 - -
Rops11g02261 2011 Coils Coil 1960 1994 - -
Rops11g02261 2011 Gene3D - 293 387 IPR042197 -
Rops11g02261 2011 Pfam NB-ARC domain 214 384 IPR002182 GO:0043531
Rops11g02261 2011 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Rops11g02261 2011 Gene3D Ribonuclease Inhibitor 476 752 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02261 Rops-Chr11 37977715 37999048 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02261 235 777 WRKY Transcription Factor Family AT5G45050 24.671 3.49e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02261 - - aprc:113851230 1135.55