Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02254 ATGGACCCTGAAAAGGCTATGGAATTGGTGGATGAGAACGCCATTTGTGTTGCTGCTATCCTTGGTTCCGCACTAAATGGAGAGTTTGAAAATGTCAAGCGTTTAAATGATCTCCTTGTTGGAAAGAATACGGGAGCTGGATGGGACACTCCTACTCATATGGATGCTGCCAATGGTGGTTTCATTGCCCCATTTATTTATCCAAAGCTTGAGTGGGACTTTTGCTTACCATTAGTGAGGAGCATCAATGAAAGCATTATCAAAGAGATATTGTTCGTGGAGTAG 285 0.4281 MDPEKAMELVDENAICVAAILGSALNGEFENVKRLNDLLVGKNTGAGWDTPTHMDAANGGFIAPFIYPKLEWDFCLPLVRSINESIIKEILFVE* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02254 94 SUPERFAMILY PLP-dependent transferases 1 88 IPR015424 -
Rops11g02254 94 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 86 IPR002129 GO:0016830|GO:0019752|GO:0030170
Rops11g02254 94 Gene3D - 1 91 IPR015421 GO:0003824
Rops11g02254 94 PANTHER GLUTAMATE DECARBOXYLASE 1 85 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02254 Rops-Chr11 37823955 37824239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02254 1 85 Calmodulin-binding Proteins AT1G65960 78.824 6.33e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02254 K01580 - han:110867917 145.976