Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02253 ATGGACCCTGAAAAGGCTGTGGAATTGGTGGATGAGAACGCCATTTGTGTTGCTGCTATCCTTGGTTCCGCACTAAATGGAGAGTTTGAAAATGTCAAGCGTTTAAATGATCTCCTTGTTGGAAAGAATACGGGAACTGGATGGGACACTCTTACTCATATGGATGCTGCCAATGGTGGTTTCATTGCCCCATTTATTTATCCAAAGCTTGAGTGGGACTTTTGCTTACCATTAGTGAGGAGCATCAATGAAAGCATTATCAAAGAGATATTGTCCGTGGAGTAG 285 0.4281 MDPEKAVELVDENAICVAAILGSALNGEFENVKRLNDLLVGKNTGTGWDTLTHMDAANGGFIAPFIYPKLEWDFCLPLVRSINESIIKEILSVE* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02253 94 PANTHER GLUTAMATE DECARBOXYLASE 1 85 IPR010107 GO:0004351|GO:0006536|GO:0030170
Rops11g02253 94 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 86 IPR002129 GO:0016830|GO:0019752|GO:0030170
Rops11g02253 94 Gene3D - 1 90 IPR015421 GO:0003824
Rops11g02253 94 SUPERFAMILY PLP-dependent transferases 1 86 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02253 Rops-Chr11 37800852 37801136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02253 1 85 Calmodulin-binding Proteins AT1G65960 78.824 2.38e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02253 K01580 - han:110867917 145.206