Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02243 ATGGCCACACAGATGCAAGATCCACCTTCGAACCCAAACCCTAATCCCAATGCGACGTCGTCTTCGACGCCTCCTTCCTCCTTATTCATCCGCGGCGGCGGTAACGGCGCTTCCGGCACTCCGGTCGTCGGTTCCGGCGCCGGAGAGACTCACTGTCACCACCGGAGAGCACACTCTGAGGTCAGTTACCGGCTGCCGGACGACATGATGGATCTCTCGCCGTCGGATCCGTTGAACGGCGGCGGATCCTCGACGGCGAGCTTGGAGGAGATCGGATCCGAAGACGACCTGTTCTCAACCTACATTGACGTTGAGAAGCTCGGAGGAGTTACGAACGGGTCGGGTAGAAACGGATCGGATCAGAGCGGTTACGGAAACGGCGCCGGAACGAGCGGTAACAATGATGGAGAGAAGAGTCCGAGCGCCTCCGCCGCCGCTCCGAGGCCGAGACACCGGCACAGTAGCTCCGTCGATGGTTCAACGTCGACGAGCATGTTCGGAGAGATCATGGAAGCGAAGAAAGCAATGCCTCCTGATAAACTCGCTGAGCTATGGTCGATTGATCCAAAGCGTGCAAAGAGAATACTTGCGAATCGGCAATCTGCTGCACGTTCAAAAGAGAGAAAGGCACGCTATATCCAAGAACTTGAGCGCAAGGTTCAGACCCTTCAAACTGAAGCCACAACACTTTCTGCCCAATTGACACTATACCAGAGGGACACAACTGGCCTGAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAACAACAGGCACAGCTTCGTGATGCTCTTAATGAAGCACTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGTGAGGCAATGAACCCCTCTGAGTCTTTTAATCTTGGAATGCACCAGATGCCATTTCCAGGGTCAAATTTCTTTTCAGTTGCACCACCTTCTGGTCACCAGAACATGCAGTTGCCTCCATTTGGTCACTCTCCATCAAACGTGCCAACTCATCAGCTGCAGCAACAAACAAATTCTCGCCAAATCTCAGACATATTGCAAAATGACCAACTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCAACCTTCGTGAAGTCCGAAGGCCCCTCAATATCTGCAAGTGAGAGTAGCACTACATTTTGA 1161 0.5237 MATQMQDPPSNPNPNPNATSSSTPPSSLFIRGGGNGASGTPVVGSGAGETHCHHRRAHSEVSYRLPDDMMDLSPSDPLNGGGSSTASLEEIGSEDDLFSTYIDVEKLGGVTNGSGRNGSDQSGYGNGAGTSGNNDGEKSPSASAAAPRPRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLAELWSIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALMKEVERLKIATGEAMNPSESFNLGMHQMPFPGSNFFSVAPPSGHQNMQLPPFGHSPSNVPTHQLQQQTNSRQISDILQNDQLGRLQGLDISSKGSTFVKSEGPSISASESSTTF* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02243 386 MobiDBLite consensus disorder prediction 49 65 - -
Rops11g02243 386 FunFam probable transcription factor PosF21 189 242 - -
Rops11g02243 386 MobiDBLite consensus disorder prediction 112 140 - -
Rops11g02243 386 MobiDBLite consensus disorder prediction 312 341 - -
Rops11g02243 386 SMART brlzneu 186 250 IPR004827 GO:0003700|GO:0006355
Rops11g02243 386 MobiDBLite consensus disorder prediction 366 386 - -
Rops11g02243 386 Coils Coil 206 233 - -
Rops11g02243 386 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 363 - -
Rops11g02243 386 Gene3D - 189 241 - -
Rops11g02243 386 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 251 IPR004827 GO:0003700|GO:0006355
Rops11g02243 386 CDD bZIP_plant_RF2 191 240 IPR044759 GO:0003700|GO:0006355
Rops11g02243 386 Pfam bZIP transcription factor 190 245 IPR004827 GO:0003700|GO:0006355
Rops11g02243 386 MobiDBLite consensus disorder prediction 1 92 - -
Rops11g02243 386 SUPERFAMILY Leucine zipper domain 190 241 IPR046347 GO:0003700|GO:0006355
Rops11g02243 386 MobiDBLite consensus disorder prediction 109 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02243 Rops-Chr11 37577235 37580290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02243 5 386 bZIP Transcription Factor Family AT2G40620 49.517 1.19e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops11g02243 bZIP_1 7.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02243 - - gmx:100775607 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02243 11 37577235 37580290 Rops11g02243 11 37577235 37580290 ECH