Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02240 ATGGTTGTGGGAACACTACTTTTCATTGTCTTATGTGCATTCACTTTGAGTTTAGCTTTTCTCCTCTCAAAATTCCTTTCAAAAGGTCAAACCAAAAATGTTCCAAAAGGGTCTCTGGGGTATCCCATCATTGGAGAGACACTTAGTTTTCTTAAAGCACAGAGGCAAGATAAGGGCTCTGAATGGTTGGAAGAAAAGGTATCTAAGTATGGTCATGTCTTCAAAACCTCTTTGATGGGTTCCCCTACAGTGTTCATCATTGGACAAGCAGGAAATAAGTTTGTACTTAGTTCCCCAGACGATGTGCTTTCTGCTAAGAAACCCCTCACCCTGCAAAAGATACTTGGAAGGCAAAGCTTAGTTGAACTTCCAGGACCGAGGTTCAGGTTAGTCAAAGGGGAAATGATAAAATTCTTGAAACCTGAATGCCTTCAGAACTATGTCAAAAAGATGGATGAGCTGGTGAATACAGAATTAATGAGGGAATTCAAAGAGAATGAAACAACTGGAGTTGTGGGGTTCATGAAGAAGCTGTCCTATGATATGGCATGCAATATATTGTTTGACATTAATGATGAGCACACTAGGGAGGCTTTGTTTGAAGACTTTATCATAGCATTTAAAGCAACATACTCTCTTCCCATCAATTTCCCTGGTACCTCATTTTGGAGAGGCCAAAAAGCCAGGGCAAGAATTGTTGAAAGGATACTTCCTATTATGAACAAAAGAAGGGAGGAACTATCAAAAGGAGTTCTAAGCTCTACTAATGATATGCTTTCATGCCTGCTTGCATTAAGAGATGAAAATCATCAACCTCTAGCTGATGATATCATTGCTGATAATTTTATTTTTTTATTTGTTGCAAGTCATGACACAACTGCTACTCTTATGAGCTTGATGATATGGAAGTTATCTAGAGATCCTGAGGTTTACAATAAAATTTTAGAAGAGCAAATGGAAATTATAAAGCAAAAGGAAGGAACAGAAGAGAGGCTAACATGGGCAGATATACAAAAGATGAAATACACATGGAGAGTTGCTCAGGAGTTGATGAGAATGATCCCTCCTTTGTTTGGCAGCTTTAGGAAAGCACTTAAAGATACTAGCTATGAAGGATATGACATACCAAAAGGGTGGCAGGTATATTGGGCAGCATGTGGAACGCACATGAATGATGATATATTCGAGAATCCACAGAAATTTGATCCATCTCGTTTTGAAAATCCAAGCAAACCAATTCCACCCTTTTCTTACCTTCCATTTGGTGCAGGGTCACATTTTTGCATTGGAAATGAGTTTGCAAGGGTTGAGACCTTGACTACCATTCACAACTTTGTAATGATGTATGAATGGTCTCAAGTTAACCCTGAGGAAACTATTACTCGTCAACCAATGCCATATCCATCAATGGGCCTCCCAATTAAGATCAAACCCAGACGTAATGTGTCTTAA 1452 0.3891 MVVGTLLFIVLCAFTLSLAFLLSKFLSKGQTKNVPKGSLGYPIIGETLSFLKAQRQDKGSEWLEEKVSKYGHVFKTSLMGSPTVFIIGQAGNKFVLSSPDDVLSAKKPLTLQKILGRQSLVELPGPRFRLVKGEMIKFLKPECLQNYVKKMDELVNTELMREFKENETTGVVGFMKKLSYDMACNILFDINDEHTREALFEDFIIAFKATYSLPINFPGTSFWRGQKARARIVERILPIMNKRREELSKGVLSSTNDMLSCLLALRDENHQPLADDIIADNFIFLFVASHDTTATLMSLMIWKLSRDPEVYNKILEEQMEIIKQKEGTEERLTWADIQKMKYTWRVAQELMRMIPPLFGSFRKALKDTSYEGYDIPKGWQVYWAACGTHMNDDIFENPQKFDPSRFENPSKPIPPFSYLPFGAGSHFCIGNEFARVETLTTIHNFVMMYEWSQVNPEETITRQPMPYPSMGLPIKIKPRRNVS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02240 483 PANTHER CYTOCHROME P450 26 33 468 - -
Rops11g02240 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Rops11g02240 483 Pfam Cytochrome P450 35 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 Gene3D Cytochrome P450 26 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 FunFam Taxadiene 5-alpha hydroxylase 26 479 - -
Rops11g02240 483 SUPERFAMILY Cytochrome P450 32 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02240 483 CDD CYP90-like 67 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02240 Rops-Chr11 37533911 37536205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02240 5 454 Cytochrome P450 AT4G19230 34.879 1.11e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02240 - - gmx:100790209 832.402