Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02238 ATGATTATCAAAGCCTTAAGGTATATTGAGAAGCCCAGGAAACACAAACTACCCCCAGGTCCCAAACCATGGCCTATGATTGGCAATCTTCCTGAAATGCTAGCAAACAAGCCTGCACCTAGGTGGATACACAAGATGATGCAACAAATGAACACTGAAATAGCATGTATCCGCCTAGGAAGTGTCCATGTTATCCCTGTGACTAGCCCCACCATTGCCCTTGAATTCTTGAGAAAACATGATGCTGCTTTTGCATCAAGACCAATGACTATGGCCACTGATATCATCAGTGGTGGTTACTTGACGCCAGCTCTTTCACCCTTTGGGGAACAATGGAAGAAAATGAAGAAAATCTTTGTCAATGAATTGTTCTCCCCCCTCAGGCATCAATGGCTTCAAGACAAAAGGAACGAAGAAGCTGATAACCTTGTCTTTTATGTCTATAACAAATGCAAAAATGTGAAAGATGGTGGACTTGTGAATGTCAGAATTGCTACAAGACATTATTGTAGTAACCTGATGAGGAAACTGGTTTTCAATAAAAGGTACTTTGGGAAAGGTAGGAATGATGGAGGGCCTGGTTTTGAGGAAACAGAATATGTAGATGCCCTTTTCACATTGCTTAAGTATGTTTTTGCATTTTGTGTTTCTGACTATGTGCCATTCTTGAGGGGACTTGACTTGGATGGTCATGAGAGCAAGGTGAAGAACGCCATGAGGATTGTGAACAAGTATAATGATCCTATCATTGATCAAAGAATCAAAGAATGGAACGATGGATCAAAGACTATTACCGGTGCAGAGGACATACTTGATATCCTGATCTCCCTCAAAGATGCCAACAGCAAACCATTATTGACATTAGAGGAAATCAAGGCGCAAAGTCTAGAACTTGTGCTTGGAGGAGTGGACAATCCATCAAATGCAGCGGAATATGCAATTGCAGAAATGATAAATCAACCAGATTTGCTGCAGCGAGCCACTGAAGAACTTGATAATGTTGTAGGAAAACAAAGGTTGGTCCAAGAATCTGATATTCCAAAACTCAACTATGTGAAAGCCTGTGCGAGAGAAGCTTTTCGCCTTCATCCCATTACACCTTTTAATCCTCCCCATGTTTGTATGAATGAAACAACGGTTGGAAATTACTTGATCCCAAAGGGTAGCCATGTAATGCTAAGCAAACAAGGACTTGGAAGAAATCCTAAAGTATGGAATGAACCCCTCAAGTTCAAGCCAGAACGCCACCTAAAAAGTGATGGATCTATGGTAGCTCTGTCTGAGCCAGATTTGAAGCTTATATCATTTAGTACAGGAAGGAGAGTTTGTCCTGGAGGTGTGCTTGGAACCACAATGACTGTTATGCTATTGGGTAGGTTGCTCCATGGTTTCACTTGGAATGCACCTCCCAATGTATCAAGGATCAATCTTACTGAGTCTGACTTCGATGGGATCCGTCTTGCTGAGCCACTTGTCGCAGCAGCAAAGTCAAGATTAGCAGCAGAACTGTATCATCTATAG 1521 0.4195 MIIKALRYIEKPRKHKLPPGPKPWPMIGNLPEMLANKPAPRWIHKMMQQMNTEIACIRLGSVHVIPVTSPTIALEFLRKHDAAFASRPMTMATDIISGGYLTPALSPFGEQWKKMKKIFVNELFSPLRHQWLQDKRNEEADNLVFYVYNKCKNVKDGGLVNVRIATRHYCSNLMRKLVFNKRYFGKGRNDGGPGFEETEYVDALFTLLKYVFAFCVSDYVPFLRGLDLDGHESKVKNAMRIVNKYNDPIIDQRIKEWNDGSKTITGAEDILDILISLKDANSKPLLTLEEIKAQSLELVLGGVDNPSNAAEYAIAEMINQPDLLQRATEELDNVVGKQRLVQESDIPKLNYVKACAREAFRLHPITPFNPPHVCMNETTVGNYLIPKGSHVMLSKQGLGRNPKVWNEPLKFKPERHLKSDGSMVALSEPDLKLISFSTGRRVCPGGVLGTTMTVMLLGRLLHGFTWNAPPNVSRINLTESDFDGIRLAEPLVAAAKSRLAAELYHL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02238 506 SUPERFAMILY Cytochrome P450 18 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Rops11g02238 506 FunFam Cytochrome P450 9 10 502 - -
Rops11g02238 506 CDD CYP79 52 499 - -
Rops11g02238 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PRINTS E-class P450 group I signature 169 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PRINTS E-class P450 group I signature 72 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 PANTHER CYTOCHROME P450 98A9 9 505 - -
Rops11g02238 506 Gene3D Cytochrome P450 4 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02238 506 Pfam Cytochrome P450 18 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02238 Rops-Chr11 37451933 37453676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02238 1 504 Cytochrome P450 AT4G39950 54.851 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02238 - K12153 gmx:100809902 741.88