Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02220 ATGAAGACAAAGGAGTCAGCAGCGGTGGCGGTCAACGGTGGTGGTGGTGGGTGGCGGCAACGGTTGTGGTGGGGTGGCGGCAACGACGATGGTGGTAGTCAACAGTTGTCGGTGACTGTCAACGGTGGCCACGATGATGACAGAGGGTGGCCAACGGCGGTGGTGGTGGGGGTGACGGTCCCATGTTTTTTATTTGGAAAACAGTTAACGGATTTTGCTGTCTCTCTCCTTCGATCGGTGAACTTCGTTTCAGTAACCATGGCAGATGAAACACAAAATGATCTGAAGGAGGAGGTTCCAGAAATTGTGCCATTTGATCCTACCAAGAAGAAGAAGAAAAAGAAAATCACAATTGTAGATCCTGCGGATGAGTCAGTGGATAAGTTGGCTGAGAAAACAGAAAATCTATCAGTTGCTGAGGGGGTTGAGAGTACATTTACTGGTTTAAAAAAAAAGAAGAAGAAGCCTGTGGAAATGAGTAACTTAAATGATGAGAGTGGAGATGCAATTGATGATCTGGATGATCAAGCTGAACAAGATGAAGGAGATGCCATTTCCATGCAACCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTTTTTAACATTTTGCGGGAGAATAATCCAGAGCTTGCTGGAGACCGGCGGAGGACTGTTATGAGGCCTCCACAAGTACTACGCGAGGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGACAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCTCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCCAAGAACTTTGAGGGAATTCTGCGACGATATATCAATGAATATGTCATTTGCCTTGGATGCAAAAGTCCTGACACAATACTTAGTAAGGAGAACCGTTTGTTCTTTCTCCGGTGTGAAAAGTGTGGATCAGGAAGATCTGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGCGTTGGCCGTAGGAACGCAGGGACATGA 1065 0.4648 MKTKESAAVAVNGGGGGWRQRLWWGGGNDDGGSQQLSVTVNGGHDDDRGWPTAVVVGVTVPCFLFGKQLTDFAVSLLRSVNFVSVTMADETQNDLKEEVPEIVPFDPTKKKKKKKITIVDPADESVDKLAEKTENLSVAEGVESTFTGLKKKKKKPVEMSNLNDESGDAIDDLDDQAEQDEGDAISMQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02220 354 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 203 353 IPR045196 GO:0003743|GO:0006413
Rops11g02220 354 SMART eIF2Bneu4 224 333 IPR002735 GO:0003743|GO:0006413
Rops11g02220 354 MobiDBLite consensus disorder prediction 149 171 - -
Rops11g02220 354 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 199 306 IPR016189 GO:0003743|GO:0006413
Rops11g02220 354 FunFam Eukaryotic translation initiation factor 2 subunit 197 339 - -
Rops11g02220 354 Gene3D - 197 339 - -
Rops11g02220 354 Pfam Domain found in IF2B/IF5 224 332 IPR002735 GO:0003743|GO:0006413
Rops11g02220 354 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 303 338 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02220 Rops-Chr11 37009805 37022808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02220 87 350 Eukaryotic Initiation Factors Gene Family AT5G20920 76.404 8.50e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02220 K03238 - gmx:100775688 492.656