Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02215 ATGAAGGCCAGCAAAGTTTATTCTGGATCTAAATGTCAATATCCTATTCCTTACAACAAACTACTCTCAATGAAGTTCCATTCTACTTCAGTGGCTTCTTTCCTTTTTGTCATAGTTATTCTTTTTCCCCTGGCTATTGCTGACCTAAGTTCAGATAAGCAAGCCCTTCTTGATTTTGCTAATGCTGTGCCCCACCGTCGGAACCTTATGTGGAATCCATCCACTTCAATCTGTACATCTTGGGTAGGCATCACTTGCAATCAAAATGGAACTCGTGTTGTTTCTGTCCGGCTCCCTGGAGTTGGAATAGTAGGCTCCATTCCATCTAATACACTCGGCAAGCTTGATGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTCAGTGGAAATCTGCCTGCAGATGTTGCTTCTCTTCCTTCTCTCCAGTACCTCTACCTCCAACATAATAACCTTTCTGGTGATATACCTGCCTCATTGTCAACCCAACTTATTATACTTGATTTGTCATATAATTCCTTCACTGGTTCCATTCCAAAGACATTACAAAATTTGACAGAATTAAGTAGTTTGAATCTCCAGAACAACTCCCTATCTGGACAGATACCTAATCTCAATGTTACTAAGCTCAAGCTTTTGAATTTAAGCTACAACCATTTGAATGGTTCTATTCCTGCGGCTCTTCAGATTTTTCCCAATTCGTCCTTTGAAGGAAACTCTCTTTTATGTGGACCACCTCTAAAGCCATGCTCAGTGATTCCCCCTACTCCTACTCCTGCTCCATCATCAGCACCAGGCAGACAAAGCTCCAAAAATAAATTGAGTAAGATAGCTATCATTGCAATTGCTGTTGGAGGAGGTGTGCTGCTATTTTTTGTAGTTCTTGTCATTGTTCTTTGCTGTTTAAAGAAGGAAGATGACAGAGGCTCCAATGCAAATAAAGGGAAGGGTCCTGGTGGCGGTAGGGGTGATAAGCCAAAAGAAGAGTTTGGGAGTGGGGTGCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTCGAGGGCAGTTCTTATAATTTTGACCTTGAAGATTTGCTGAGAGCTTCAGCGGAAGTTCTGGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCAACAACAGTTGTGGTGAAAAGGTTGAAAGAAGTTGTGGTAGGCAAGAGGGACTTTGAACAGCAGATGGAGATTATGGGAAGGGTTGGACAACATGCAAACGTTGTGCCACTTCGCGCTTACTATTATTCCAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCCAGGTGGCAACTTATCCACACTCTTACATGGCAGTCGGACAGGTGGAAGAACTCCATTAGATTGGGACTCCCGAGTTAAAATATCACTTGGCACTGCCAAAGGAATTGCTCACATTCATTCTGTTGGTGGTGTCAAATTCACACATGGAAACATTAAGTCCTCTAATGTCCTCATCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTAACCCCACTTATGAATGTTCCTGCAACCCCTTCTAGAGCTGCAGGTTATCGTGCTCCTGAGGTGATTGAAACCCGCAAGCACTCTCATAAGTCAGATGTGTACAGCTTTGGTGTCCTCCTTCTCGAGATGCTTACAGGGAAGGCACCTCTCCAATCTCCGGGACGCGAAGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAAGAATGGACTGCTGAGGTTTTTGATGTTGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCTTGTGTAGCAAAGATGCCAGATATGAGACCTAGCATGGATGAAGTAGTGAGAATGATTGAAGAGATCCGGCAATCTGACTCAGAGAACCGACCATCTTCTGAAGAGAATAAATCTAAGGACTCAAAAATTCAAACTCCATAG 1965 0.428 MKASKVYSGSKCQYPIPYNKLLSMKFHSTSVASFLFVIVILFPLAIADLSSDKQALLDFANAVPHRRNLMWNPSTSICTSWVGITCNQNGTRVVSVRLPGVGIVGSIPSNTLGKLDAVKIISLRSNLLSGNLPADVASLPSLQYLYLQHNNLSGDIPASLSTQLIILDLSYNSFTGSIPKTLQNLTELSSLNLQNNSLSGQIPNLNVTKLKLLNLSYNHLNGSIPAALQIFPNSSFEGNSLLCGPPLKPCSVIPPTPTPAPSSAPGRQSSKNKLSKIAIIAIAVGGGVLLFFVVLVIVLCCLKKEDDRGSNANKGKGPGGGRGDKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESTTVVVKRLKEVVVGKRDFEQQMEIMGRVGQHANVVPLRAYYYSKDEKLLVYDYVPGGNLSTLLHGSRTGGRTPLDWDSRVKISLGTAKGIAHIHSVGGVKFTHGNIKSSNVLINQDNDGCISDFGLTPLMNVPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGREDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRMIEEIRQSDSENRPSSEENKSKDSKIQTP* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02215 654 MobiDBLite consensus disorder prediction 309 334 - -
Rops11g02215 654 MobiDBLite consensus disorder prediction 628 654 - -
Rops11g02215 654 Gene3D Transferase(Phosphotransferase) domain 1 435 653 - -
Rops11g02215 654 FunFam Leucine-rich repeat receptor-like protein kinase 51 161 - -
Rops11g02215 654 FunFam pollen receptor-like kinase 1 327 434 - -
Rops11g02215 654 MobiDBLite consensus disorder prediction 320 334 - -
Rops11g02215 654 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Rops11g02215 654 Pfam Leucine Rich Repeat 209 229 IPR001611 GO:0005515
Rops11g02215 654 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 435 642 - -
Rops11g02215 654 ProSitePatterns Protein kinases ATP-binding region signature. 365 396 IPR017441 GO:0005524
Rops11g02215 654 PANTHER OS05G0588300 PROTEIN 35 642 - -
Rops11g02215 654 Pfam Protein kinase domain 362 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02215 654 CDD STKc_IRAK 365 630 - -
Rops11g02215 654 SUPERFAMILY Protein kinase-like (PK-like) 363 637 IPR011009 -
Rops11g02215 654 ProSiteProfiles Protein kinase domain profile. 359 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02215 654 Pfam Leucine rich repeat 106 152 IPR001611 GO:0005515
Rops11g02215 654 Pfam Leucine rich repeat N-terminal domain 50 87 IPR013210 -
Rops11g02215 654 SUPERFAMILY L domain-like 51 250 - -
Rops11g02215 654 Gene3D Ribonuclease Inhibitor 49 205 IPR032675 -
Rops11g02215 654 FunFam Leucine-rich repeat receptor-like protein kinase 162 250 - -
Rops11g02215 654 Gene3D Ribonuclease Inhibitor 206 251 IPR032675 -
Rops11g02215 654 Gene3D Phosphorylase Kinase; domain 1 327 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02215 Rops-Chr11 36985897 36990354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02215 23 652 Receptor kinase-like Gene Family AT5G58300 67.762 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops11g02215 Pkinase 4.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02215 - - gmx:100796171 1111.29