Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02212 ATGATGTATCTTTCAAAGGGTTGCAAGCATGAAGTTGTTTTCATCTTATGGTTCTGCTGCTATTTGCTACTGGCTGTTGCTCAGGAGGAGCTTGATATCACTGACCCCACTGAAGTTGAAGCATTGAGAACCATGAAGAAAAGTTTGACTGATCCTAATGGAAATTTAAGCAATTGGAACCAGGGAGACCCGTGTTCATCTAACTGGACAGGAATTTTGTGTTTCAATGAAACATTAGTGGATGGTTTTCTACATGTTCAAGAATTGCGACTACTGAATTTGAACCTGTCTGGAACTTTGGCACCAGATATTGGCAACTTAGCTTATCTGGAAATATTCCTTCTTGACAACAACAACTTATCAGGATATCTTCCTCCTGAGCTATCCAATATGCCAAACTTACGTATACTTCAACTTGATAACAATAACTTTGAAGGAAATAGCATTCCGGATACTTATGGCAACATGTCAAAATTGGTGAAGTTGAGCCTTAGGAATTGCAACTTGAAAGGACCAATTCCTGATTTAAGCAGGATACCACAATTCCTTTATCTTGATCTCAGTTCTAATCAGTTGAATGAATCAATTCCTCCTAATAAGCTTTCTGAAAATGTCACTACCATGTCACTTGCAAACAATTCATTGGATGGCAGTGTTCCTTCCATCATTTGGCAAGACAGGACTTTAAATGGTACAGAAAGATTGATCTTGGAATTGGAAAATAATAATTTTACAACCATATCAGGCAGCACTAATCTTCCTCCAAATGTCACACTCTTGCTTGATGGGAATCCTCTATGCTCAAATAACACCTTGGATCAGTTCTGTAAATCTGAAAGTGTTAATGACACAAATGGCACATTTCCAACAAACTCCAGTGACTTTTGTCCCACTCAATTATGCCCACCTTCTTATGAAACCTCTGTGAATTGTTTCTGTGCTGCCCCATTGCTCATTGATTATCGACTGAGAAGTCCTGGATTTTCAGATTTTCCTCCATACTTGGATGCATTTCAGAAATACCTGACTTCTAATCTTTCCATACATACCAGTCAACTAAACTTTACTTTTAGGTGGCAAGTAGGACCTCGTTTGAGAATGAACTTGAAGCTTTTCCCTTTATATGTTAATGAAAATAGTTCTCATACTTTCAATAGAAGTGAGGTCTTACGGATCATAAGCATGTTCACAGGATGGAAAATTCCTAACCATGATTTGTTTGGGCCTTATGACCTGATGCGCTTCACTCTCCTGGATCCTTACAAGGATGTGATTGACACCACTTCAAAATCAGGCATAGGTACAGGTGCATTGGTTGGCATAATCTTAGGGTCAATTGCCTGTGCAGTGACATTGTCTGCATTTGTTATTCTTTTTATATTAAGAATACGATCGAGAAAGCATCATGCAGTTTCCAAAGCACGTCATGCATCTAAGAGCTCAATAAAAATTGATGGTGTAAGGGCCTTTAGTTTTGGAGAATTGTCCTCAGCTACAAACAATTTTAACAACTCTGCTCAAGTTGGACAAGGGGGTTATGGCAAAGTTTATAAAGGTATTCTTTCTGATGGCACAGTTGTTGCCATAAAACGTGCACAAGAGGGATCACTGCAAGGTGAGAAGGAGTTCTTAACAGAAATATCATTACTATCAAGGTTACATCATCGTAACCTTGTGTCTCTAGTTGGATACTGTGATGAAGAAACAGAACAGATGCTGGTTTATGAATTTATGTCGAATGGCACACTAGGGGACCACCTTTCTGTTACATCACAAAAGCCTTTGACTTTTGCCATGAGATTGAAGATAGCACTAGAGTCAGCTAAAGGTCTTACGTATCTACACACAGAAGCTGATCCTCCAATATTTCACAGAGATGTCAAGGCCAGCAACATATTATTAGACTCTAAGTTCACTACAAAAGTGGCTGATTTTGGACTTTCAAGGCTTGCACCAGTTGCAGATATTGAAGGAATTGTGCCTGGTCATATATCTACAACAGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCATAAGATGACTGAAAAGAGTGATGTTTATAGTCTTGGTGTTCTGTTTCTGGAACTTTTGACTGGGATGAAACCTATCTCACATGGCAAAAATATTGTTAGAGAGGTTCTGGCTACATACCAATCTGGTGTGTTATTTTCAATTATTGATGGACGTATGGGGTCTTATCCGTCTGAACATGTGGAGAAATTTTTGAAGTTGGCCTTGAAATGTTGTGAAGATGAGCCAGAAGCACGTCCTAAAATGGCAGAAGTGGTTAGAGAGCTTGAAAACATATGGTCCATGATACCAGATTTAGATACCAATAGAGTTGAATCTATAACCAATGATTCTGGTCAAGCAGTCAATACATCTTCTTCTTCATCTGCTATAAGGACTCCATTTGTATCAAGAGATGTGTCAGGTAGTAACCCTGATAGTGGAGTAATATCAAGCGTTGTGCCAAGATAG 2496 0.3898 MMYLSKGCKHEVVFILWFCCYLLLAVAQEELDITDPTEVEALRTMKKSLTDPNGNLSNWNQGDPCSSNWTGILCFNETLVDGFLHVQELRLLNLNLSGTLAPDIGNLAYLEIFLLDNNNLSGYLPPELSNMPNLRILQLDNNNFEGNSIPDTYGNMSKLVKLSLRNCNLKGPIPDLSRIPQFLYLDLSSNQLNESIPPNKLSENVTTMSLANNSLDGSVPSIIWQDRTLNGTERLILELENNNFTTISGSTNLPPNVTLLLDGNPLCSNNTLDQFCKSESVNDTNGTFPTNSSDFCPTQLCPPSYETSVNCFCAAPLLIDYRLRSPGFSDFPPYLDAFQKYLTSNLSIHTSQLNFTFRWQVGPRLRMNLKLFPLYVNENSSHTFNRSEVLRIISMFTGWKIPNHDLFGPYDLMRFTLLDPYKDVIDTTSKSGIGTGALVGIILGSIACAVTLSAFVILFILRIRSRKHHAVSKARHASKSSIKIDGVRAFSFGELSSATNNFNNSAQVGQGGYGKVYKGILSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLVGYCDEETEQMLVYEFMSNGTLGDHLSVTSQKPLTFAMRLKIALESAKGLTYLHTEADPPIFHRDVKASNILLDSKFTTKVADFGLSRLAPVADIEGIVPGHISTTVKGTPGYLDPEYFLTHKMTEKSDVYSLGVLFLELLTGMKPISHGKNIVREVLATYQSGVLFSIIDGRMGSYPSEHVEKFLKLALKCCEDEPEARPKMAEVVRELENIWSMIPDLDTNRVESITNDSGQAVNTSSSSSAIRTPFVSRDVSGSNPDSGVISSVVPR* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02212 831 SMART serkin_6 502 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02212 831 CDD STKc_IRAK 508 774 - -
Rops11g02212 831 SUPERFAMILY L domain-like 34 266 - -
Rops11g02212 831 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Rops11g02212 831 SUPERFAMILY Protein kinase-like (PK-like) 487 791 IPR011009 -
Rops11g02212 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Rops11g02212 831 FunFam Leucine-rich repeat protein kinase family protein 466 577 - -
Rops11g02212 831 MobiDBLite consensus disorder prediction 791 831 - -
Rops11g02212 831 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 578 787 - -
Rops11g02212 831 ProSiteProfiles Protein kinase domain profile. 502 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02212 831 Pfam Protein kinase domain 503 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02212 831 MobiDBLite consensus disorder prediction 791 825 - -
Rops11g02212 831 FunFam Nuclear pore complex protein NUP107 35 198 - -
Rops11g02212 831 Gene3D Transferase(Phosphotransferase) domain 1 578 791 - -
Rops11g02212 831 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Rops11g02212 831 Gene3D Phosphorylase Kinase; domain 1 472 577 - -
Rops11g02212 831 Gene3D Ribonuclease Inhibitor 151 311 IPR032675 -
Rops11g02212 831 Gene3D Ribonuclease Inhibitor 37 150 IPR032675 -
Rops11g02212 831 PANTHER RECEPTOR-LIKE PROTEIN 55 55 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02212 Rops-Chr11 36898364 36910787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02212 54 787 Receptor kinase-like Gene Family AT5G01950 52.455 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g02212 Pkinase 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02212 - - gmx:100786467 1097.8