Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02210 ATGATTGTCCTCACACTGCTCATTGTTGTTGCAGTGATTGACACCACTTCAAAATCAGTAGGTACAGGTGCATTGGTTGGCATAATCTTAGGGTCAATTGCCTGTGCAGTGACATTGTCTGCATTTGTTATTCTTTTTATATTAAGAATACGATCGAGAAAGCATCATGCAGTTTCCAAAGCAAGTCATGCATCTAAGAGCTCAATAAAAATTGATGGTGTAAGGGCCTTTAGTTTTGGAGAATTGTTCTCAGCTACAAACAATTTTAGCAACTCTGCTCAAGTTGGACAAGGGGGTTATGGTAGAGTTTATAAAGGTATTCTTTCTGATGGCAAAGTTGTTGCCATAAAACGTGCACAAGAGGGATCACTGCAAGGTGAGCAGGAGTTCTTAACAGAAATATCATTACTATCAAGGTTACATTGTAACCTTGTGTCTCTCATTGGATACTGTGATGAAGAAGCTGAACAGATGCTGGTTTATGAATTTATGTCGAATGGCACACTAGGGGACCACCTTTCTGAGTACTTCTTAACTCACAAGATGATCGACAAGAGTGATGTTTATAGTCTTGGCGTTGTGTTTTTAGAACTTTTGACTGGGATGAAACCTATCTCACATGGCAAAAATCTTGTTAGAGAGGTTCATGCTGCATATCAATCTGGTGTGTTATTTTTAATTATTGATGGACATATGGGGTCTTATCCATCTGAGCATGTGGAGAAATTTTTGAAGTTGGCCTTGAAATGTTGTGAAGATAAGCCAGAAGCACGTCCTAAAATGGCAGAAGTGGTTAGAGAGCTTGAAAACATATGGTCCATGATACCAGATTTAGATACCAATAGAGTTGAATCTATAACCAATGATTCTGGTCAAGCAGTCAATACATCTTCTTCATCCTCTGCTATAAGGACTCCATTTGTATCAAGAGATGTGTCAGGTAGTAACCCTGATAGTGGAGTAATATCAAGCATTGTGCCAAGATAG 987 0.388 MIVLTLLIVVAVIDTTSKSVGTGALVGIILGSIACAVTLSAFVILFILRIRSRKHHAVSKASHASKSSIKIDGVRAFSFGELFSATNNFSNSAQVGQGGYGRVYKGILSDGKVVAIKRAQEGSLQGEQEFLTEISLLSRLHCNLVSLIGYCDEEAEQMLVYEFMSNGTLGDHLSEYFLTHKMIDKSDVYSLGVVFLELLTGMKPISHGKNLVREVHAAYQSGVLFLIIDGHMGSYPSEHVEKFLKLALKCCEDKPEARPKMAEVVRELENIWSMIPDLDTNRVESITNDSGQAVNTSSSSSAIRTPFVSRDVSGSNPDSGVISSIVPR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02210 328 MobiDBLite consensus disorder prediction 288 328 - -
Rops11g02210 328 Gene3D Phosphorylase Kinase; domain 1 58 158 - -
Rops11g02210 328 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 175 283 - -
Rops11g02210 328 MobiDBLite consensus disorder prediction 288 322 - -
Rops11g02210 328 Pfam Protein kinase domain 90 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02210 328 Gene3D Transferase(Phosphotransferase) domain 1 159 311 - -
Rops11g02210 328 SUPERFAMILY Protein kinase-like (PK-like) 79 278 IPR011009 -
Rops11g02210 328 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Rops11g02210 328 ProSiteProfiles Protein kinase domain profile. 89 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02210 328 FunFam receptor-like protein kinase FERONIA 51 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02210 Rops-Chr11 36864891 36868703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02210 167 284 Receptor kinase-like Gene Family AT5G01950 60.169 3.10e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g02210 Pkinase 2.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02210 - - gmx:100786467 233.417