Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02209 ATGTTGCTTCCTGGGAGAGAAAAAGTGCCCTGCTTTGTTCAAGAGAGATATTTGAGAGTTCTGATGATGTATCTTTCAAAGGGTTGCAAGCATGAAATTGTTTTGATCTTATGGTTCTGCTGCTATTTGCTACTGGCTGTTACTCAGGAGGAGCTTGATATCACTGACCCAGCTGAAGTTGAGGCATTGAATACCATAAAGAAAAGTTTGATTGATCCTAATGGAAATTTGAGCAATTGGGACCAGGGAGACCCATGTACATCTTCTTGGACAGGAGTTGTGTGTTTTAACGAAACATTAGTGGATGGCTTTCTACATGTTCAAGAACTGCAACTGCTGAATTTGAACCTGTCTGGAACTTTAGCACCAGATATTGGCAACTTAGCTTATCTGGAAATATTGAGTTTCATTTGGAACAACATAAGTGGGAGTATTCCGAAGGAAATTGGCAATATCAAATCTTTGCAACTTTTGCTCCTGAATGGAAATCAATTAACAGGTGCACTGCCAGAAGAGCTTGGCTATCTTCCAAACCTACGTATATTGCAAATTGATGAAAACCACATATCAGGACCTATACCAACATCATTTGCAAACCTGAACAAGACACAACACTTTCACATGAACAATAATTCACTTTGCGGGCAAATCCCACCAGAACTTTCCCGATTACCAAGCCTTATTCACCTCCTTCTCGAGAGCAACAACTTATCAGGATATCTTCCTCCTGAGCTATCCAATATGCCAAACTTAAATACACTTCAACTTGATAACAATAACTTCGGCGGAAATAGCATTCCGGACACTTATGGCAACATGTCAAAATTGGTGAAGTTGAGCCTTAGGAATTGCAACTTAAAAGGACCATTTCCTGAGTTAAGCAGGATACCACAACTCCTTTATCTTGATCTCAGTTCCAATCAGTTGAATGAATCAATTCCTCTTAATAAGCTCTCTGAAAATGTCACAACCATTATTCTATCAAACAACAAACTTACAGGAACTATTCCATCCTACTTTTCTGGTCTTCCGCGTCTCCAGAGAATGTCACTTGCAAACAATTCATTGGATGGCAGTGTTCCTTCCATCATTTGGCAGAACAGGACTTTAAATGGAACAGAAAGATTGATTTTGGAGTTGGAAAATAATAAATTTACAACCATATCAGGAAGTACTGATCTTCCCCCAAATATCACACTCGTGCTTGATGGGAATCCTTTATGCTCAAATAGTACCTTGGACCAGTTTTGTAAATCTGAAGGTGCTAATGACACAAATGAAAAAATTCCAACAAACTCTAGTGACTCTTGTCCCACTCAATCATGCCCCTCTCCTTATGAATACTCAGTGCATTGTTTCTGTGCTGTCCCATTGCTCATTGGTTATCGACTTCAAAGTCCTGCATTTTCAGATTTTCCTCCATACATGATTACATTTAAAGAATACCTGACTTCTGGTCTTAACATACACATCACTCAGCTAAATCTTACTTTTCGATGGCAAGTAGGACATCGACTAAGAATAAACTTAAAGATTTTTCCTGTATATGTTGATAGCAATAGTTCTCATACTTTCAATAGAAGTGAGGTCCTACGGATCATAAGCATTTTCAGAGGAGTGAAAATTCCGAACGATGATTATTTTGGGCCTTATGAACTAATGGACTTGACTCTCCTGGATCCTTACAAGAAGGATGTAATTGACACCTCTTCAAAATCCGACATAGGTACGGGGGCATTAATTGGCATAATCTTAGGGTCAATTGCCTGTGCAGTGACGTTGTCTACAATGGTTATTCTTTGTATATTAAGAATACGATTGAGATATCGTCATGCAGTTTCCAAATCATATCATTCATCTAAGATCTCAATTGATGGTGTAAGGACCTTTACTTTTGGAGAATTGTCCTCAGCTACAAACAATTTTAGCAACTCTGCTCAAGTTGGACAAGGGGGCTATGGGAAAGTTTACAAAGGTATTCTTTCTGATGGCATAGTTATTGCAATAAAACGTGCACAAGAGGGATCACTGCAAGGTGAGAAGGAGTTCCTCACAGAAATATCAATATTATCAAGGTTACATCATCGTAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAAGCTGAACAGATGCTGGTTTATGAATTTATGTCGAATGGCACACTAAAGGACCACCTTTCTGTTACGTCCGAAAAACCTCTGACTTTTGCTATGAGATTGAAGCTAGCGCTAGGGTCAGCTAAAGGTCTTACATATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCTAAATTCACAGCAAAAGTGGCTGATTTTGGACTTTCACGGCTTGCACCAGTTGCAGATATTGTAGGAATTGTGCCTGGTCATATATCTACAACAGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCCTAACTCACGAATTGACCAACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGATGAAGCCTATCTCACATGGAAAAAATATTGTTAGAGAGGTTCGTGCTGCATACCGATCTGGTGTGATATTTTCAATTATTGATGGACGTATGGGGTCTCATCCATCTGAGCATGTGGAGAAATTTTTGAAGTTGGCCCTAAAGTGTTGTGAAGACAAGCCATATGCACGTCCTAAAATGGTAGAGGTGGTTAGGGAGCTTGAAAACATATGGTCTGTGATGCTAGATTCAGATACTAGGAGAGTTGAATTTATAGCCATTGATTCTTGCCAAGCAGTCAATACATCTTCTTCATCCTCTGCTATAAGGACTCCTTTCGAATCAACAGATGTGTCAGGTAGTAACCTTTTTAGTTGA 2889 0.3943 MLLPGREKVPCFVQERYLRVLMMYLSKGCKHEIVLILWFCCYLLLAVTQEELDITDPAEVEALNTIKKSLIDPNGNLSNWDQGDPCTSSWTGVVCFNETLVDGFLHVQELQLLNLNLSGTLAPDIGNLAYLEILSFIWNNISGSIPKEIGNIKSLQLLLLNGNQLTGALPEELGYLPNLRILQIDENHISGPIPTSFANLNKTQHFHMNNNSLCGQIPPELSRLPSLIHLLLESNNLSGYLPPELSNMPNLNTLQLDNNNFGGNSIPDTYGNMSKLVKLSLRNCNLKGPFPELSRIPQLLYLDLSSNQLNESIPLNKLSENVTTIILSNNKLTGTIPSYFSGLPRLQRMSLANNSLDGSVPSIIWQNRTLNGTERLILELENNKFTTISGSTDLPPNITLVLDGNPLCSNSTLDQFCKSEGANDTNEKIPTNSSDSCPTQSCPSPYEYSVHCFCAVPLLIGYRLQSPAFSDFPPYMITFKEYLTSGLNIHITQLNLTFRWQVGHRLRINLKIFPVYVDSNSSHTFNRSEVLRIISIFRGVKIPNDDYFGPYELMDLTLLDPYKKDVIDTSSKSDIGTGALIGIILGSIACAVTLSTMVILCILRIRLRYRHAVSKSYHSSKISIDGVRTFTFGELSSATNNFSNSAQVGQGGYGKVYKGILSDGIVIAIKRAQEGSLQGEKEFLTEISILSRLHHRNLVSLIGYCDEEAEQMLVYEFMSNGTLKDHLSVTSEKPLTFAMRLKLALGSAKGLTYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVADIVGIVPGHISTTVKGTPGYLDPEYFLTHELTNKSDVYSLGVVFLELLTGMKPISHGKNIVREVRAAYRSGVIFSIIDGRMGSHPSEHVEKFLKLALKCCEDKPYARPKMVEVVRELENIWSVMLDSDTRRVEFIAIDSCQAVNTSSSSSAIRTPFESTDVSGSNLFS* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02209 962 Gene3D Ribonuclease Inhibitor 319 408 IPR032675 -
Rops11g02209 962 Gene3D Ribonuclease Inhibitor 212 318 IPR032675 -
Rops11g02209 962 SUPERFAMILY L domain-like 64 416 - -
Rops11g02209 962 PANTHER RECEPTOR-LIKE PROTEIN 55 66 914 - -
Rops11g02209 962 ProSitePatterns Protein kinases ATP-binding region signature. 648 670 IPR017441 GO:0005524
Rops11g02209 962 Pfam Protein kinase domain 643 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02209 962 CDD STKc_IRAK 648 914 - -
Rops11g02209 962 ProSiteProfiles Protein kinase domain profile. 642 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02209 962 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 718 927 - -
Rops11g02209 962 FunFam Leucine-rich repeat protein kinase family protein 607 717 - -
Rops11g02209 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Rops11g02209 962 Gene3D Ribonuclease Inhibitor 57 211 IPR032675 -
Rops11g02209 962 Pfam Leucine rich repeat N-terminal domain 57 95 IPR013210 -
Rops11g02209 962 ProSiteProfiles Leucine-rich repeat profile. 298 319 IPR001611 GO:0005515
Rops11g02209 962 Gene3D Phosphorylase Kinase; domain 1 612 717 - -
Rops11g02209 962 Gene3D Transferase(Phosphotransferase) domain 1 718 930 - -
Rops11g02209 962 SUPERFAMILY Protein kinase-like (PK-like) 627 936 IPR011009 -
Rops11g02209 962 SMART serkin_6 642 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02209 962 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 57 218 - -
Rops11g02209 962 Pfam Leucine rich repeat 321 361 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02209 Rops-Chr11 36813486 36842462 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02209 34 924 Receptor kinase-like Gene Family AT5G01950 56.733 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g02209 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02209 - - gmx:100786467 1362.82