Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02206 ATGGTGATGTATCTTTCAAAGGGTTGCAAGCATGAAGTTGTTTTCATCTTATGGTTCTGCTGCTATTTGCTGCTTCTGGCTGTTGCTCAGGAGGAGCTTGATATAGCTGACCCCACTGAAGTTGAGGCATTGAATGCCATAAAGAAAAGTTTGATTGATCCTAATGGAAATTTGAGCAATTGGGACCAGGGAGACCCATGTACATCTAGCTGGACAGGAGTTGTGTGTTTTAACAAAACACTAGTGGATGGCTTTCTACATGTTCAAGAACTGCAACTGCTGAATTTGAACCTATCTGGAACTTTGGCACCAGATATTGGCAACTTAGCTTATCTGGAAATATTGAGTTTCATTTGGAACAACATAAGTGGGAGTATCCCGAAGGAAATTGGCAATATCAAATCTTTGCAACTTTTGCTCCTGAATGGAAATCAATTAACAGGTGCACTGCCAGAGGAGCTTGGATATCTTCCAAACCTATGGTTACTGCAAATTGATGAAAACCACATATCAGGACCTATACCAACATCATTTGCAAACCTGAACATGACAAGACACTTTCACATGAACAATAATTCACTTAGCGGGCAAATCCCACCAGAACTTTCCCGATTACCAAGCCTTATTCACCTCCTTCTCGAGAACAACAACTTATCAGGATTTCTTCCTCCTGAGCTATCCAATATGCCAAACTTAAGTACACTTCAACTTGATAACAATAACTTCGGCGGAAATAGCATTCCGGACACTTATGGCAACATGTCAAAATTGTTGAAGTTGAGCCTTAGGAATTGCAACTTGAAAGGAACAATTCCTGAGTTAAGCAGGATACCACAACTTCTTTATCTTGATCTCAGTTCCAATCAGTTGAATGAATCAATTCCTCTTAATAAGCTCTCTGAAAATGTCACAACCATTATTATATCAAACAACAAACTTACAGGAACTATTCCATCCTACTTTTCTGGTCTTCCACGTCTCCAAAGAATGTCACTTGCAAACAATTCATTGGATGGCAGTGTTCCTTCCATCATTTGGCAGAACAGGACTTTAAATGGAACAGAAAGATTGAGCTTGGAGTTGGAAAATAATAAATTTACAACCATATCAGGAAGTATTGATCTTACCCCAAATATCACACTCTTGCTTGATGGGAATCCTTTATGCTCAAATAGTACCTTGGATCAGTTCTGTAAATCTGAAGGTGCCAATGACACAAATGACAAATTTCCAACAAACTCTAGTGACTCTTGTCCCACTCAATCATGCCCCCCTCCTTATGAATACTCAGTGCATTGTTTCTGTGCTGTCCCATTGCTCATTGGTTATCGACTGCAAACTCCTGCATTTTCATATTTTCCTCCATACATGATTAGATTTGAAGAATACCTGACTTCTGGTCTTAACATACACACCACTCAACTAAATCTTACTTTTCGGTGGCAAGTAGAACATCGACTGAGAATAAACTTAAAGATTTTTCCTGTATATGTTGATAGCAATAGTTCTCATACTTTCAATGGAAGTGAGGTCCTACGGATCATAAGCATTTTCAGAGGATTGAAAATTCCTAACGATGATTATTTTGGGCCTTATGAACTAATGGACTTGACTCTCCTGGATCCTTACAAGAAGGATGTAATTGACACCTCTTCAAAATCAGGCACAGGTACGGGGGCATTGGTTGGCATAATCTTAGGGTCAATTGCTTGTGCAGTGACATTGTCTACAATTGTTATTCTTTTTATATTAAGAATACGATTGAGATATCGTCATGCAGTTTCCAAATCATGTCATTCATCTAAGATCTCAATTGATGGCGTAAGGACCTTTACTTTTGGAGAATTGTCCTCAGCTACAAACAATTTTAGCAACTCTGCTCAAGTTGGACAAGGGGGCTATGGGAAAGTTTATAAAGGTATTCTTTCTAATGGCACAGTTGTTGCAATAAAACGTGCACAGGAGGGATCACTGCAAGGTGAGAAGGAGTTCCTCACAGAAATATCAATATTATCAAGGTTACATCATCGTAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAAGTCGAACAGATGCTGGTTTATGAATTTATGTCGAATGGCACACTAGGGGACCACCTTTCTGTTATGTCAGAAAAACCTCTGACTTTTGCTATGAGATTGAAGATAGCGCTAGGTTCAGCTAAAGGTCTTACATATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCTAAATTCACTGTAAAAGTGGCTGATTTTGGACTTTCAAGGCTTGCACCAGTTGCAGATATTGTAGGAATTGTGCCTGGTCATGTATCTACAACAGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGATGAAGCCTATCATACATGGAAAAAATATTATTAGAGAGGTTCATACTGCATACCGATCTGGTGTGATATTTTCAATTATTGATGGACGTATGGGGTCTTATCCACCTGAGCATGTGGAGAAATTTTTGAAGTTGGCCCTAAAGTGTTGTGAAGACAAGCCAGATGCACGTCCTAAAATGGTAGAGGTGGTTAGGGAGCTTGAAAACATATGGTCTGTGATGCCAGATTCAGATACTAGGAGAGCTGAAATTATAGCCATTGATTCTTGCCAAGATATCAATACATCTTCTTCATCCTCTGCTATAAGGACTCCTTTCGAATCAAGAGATGTGTCAGCCCCTTATACAACCTTCGGTATTAGTTACCATATTATAGGAAATGCACATGGTTCTATGATGAGAGAGTATGACCGTGCTGCTAACATCGTTCTTGATGCTCAAATTGTTAATGCTAATAGTAGGATTCTTGATAGAGCAGCCATGAAAGAAGACCTATTTTATGCACTAAGAAGAGGTGGAAGAGATGGCCATAGGTGGCACCAAACTTCTATGATGAGAGAGTATGACCGTGCTGCTAACATCGTTCTTGATGCTCAAATTGTTAATGCTAATGGTAGGATTCTTGATAGAGCAACCATGAAAGAAGACCTATTTTACGCACTAAGAAGAGGTGGAAGAGGGTCATGGGTCCTTAATGAATTGGAATCCATATGGAAAAATGATGAGTAG 3204 0.3951 MVMYLSKGCKHEVVFILWFCCYLLLLAVAQEELDIADPTEVEALNAIKKSLIDPNGNLSNWDQGDPCTSSWTGVVCFNKTLVDGFLHVQELQLLNLNLSGTLAPDIGNLAYLEILSFIWNNISGSIPKEIGNIKSLQLLLLNGNQLTGALPEELGYLPNLWLLQIDENHISGPIPTSFANLNMTRHFHMNNNSLSGQIPPELSRLPSLIHLLLENNNLSGFLPPELSNMPNLSTLQLDNNNFGGNSIPDTYGNMSKLLKLSLRNCNLKGTIPELSRIPQLLYLDLSSNQLNESIPLNKLSENVTTIIISNNKLTGTIPSYFSGLPRLQRMSLANNSLDGSVPSIIWQNRTLNGTERLSLELENNKFTTISGSIDLTPNITLLLDGNPLCSNSTLDQFCKSEGANDTNDKFPTNSSDSCPTQSCPPPYEYSVHCFCAVPLLIGYRLQTPAFSYFPPYMIRFEEYLTSGLNIHTTQLNLTFRWQVEHRLRINLKIFPVYVDSNSSHTFNGSEVLRIISIFRGLKIPNDDYFGPYELMDLTLLDPYKKDVIDTSSKSGTGTGALVGIILGSIACAVTLSTIVILFILRIRLRYRHAVSKSCHSSKISIDGVRTFTFGELSSATNNFSNSAQVGQGGYGKVYKGILSNGTVVAIKRAQEGSLQGEKEFLTEISILSRLHHRNLVSLIGYCDEEVEQMLVYEFMSNGTLGDHLSVMSEKPLTFAMRLKIALGSAKGLTYLHTEADPPIFHRDVKASNILLDSKFTVKVADFGLSRLAPVADIVGIVPGHVSTTVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMKPIIHGKNIIREVHTAYRSGVIFSIIDGRMGSYPPEHVEKFLKLALKCCEDKPDARPKMVEVVRELENIWSVMPDSDTRRAEIIAIDSCQDINTSSSSSAIRTPFESRDVSAPYTTFGISYHIIGNAHGSMMREYDRAANIVLDAQIVNANSRILDRAAMKEDLFYALRRGGRDGHRWHQTSMMREYDRAANIVLDAQIVNANGRILDRATMKEDLFYALRRGGRGSWVLNELESIWKNDE* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02206 1067 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 699 908 - -
Rops11g02206 1067 Gene3D - 1009 1054 IPR016169 -
Rops11g02206 1067 Gene3D - 941 998 IPR016169 -
Rops11g02206 1067 CDD STKc_IRAK 629 895 - -
Rops11g02206 1067 Gene3D Ribonuclease Inhibitor 37 199 IPR032675 -
Rops11g02206 1067 SMART serkin_6 623 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02206 1067 ProSiteProfiles Leucine-rich repeat profile. 279 300 IPR001611 GO:0005515
Rops11g02206 1067 Pfam Protein kinase domain 624 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02206 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Rops11g02206 1067 ProSiteProfiles Protein kinase domain profile. 623 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02206 1067 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Rops11g02206 1067 PANTHER RECEPTOR-LIKE PROTEIN 55 47 895 - -
Rops11g02206 1067 Gene3D Phosphorylase Kinase; domain 1 594 698 - -
Rops11g02206 1067 Gene3D Ribonuclease Inhibitor 200 401 IPR032675 -
Rops11g02206 1067 Gene3D Transferase(Phosphotransferase) domain 1 699 913 - -
Rops11g02206 1067 SUPERFAMILY Protein kinase-like (PK-like) 608 915 IPR011009 -
Rops11g02206 1067 SUPERFAMILY L domain-like 47 394 - -
Rops11g02206 1067 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Rops11g02206 1067 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 38 199 - -
Rops11g02206 1067 FunFam Leucine-rich repeat protein kinase family protein 588 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02206 Rops-Chr11 36691108 36712875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02206 16 905 Receptor kinase-like Gene Family AT5G01950 57.111 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g02206 PK_Tyr_Ser-Thr 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02206 - - gmx:100786467 1359.36