Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02198 ATGGTGATGTATCTTTCAAAGGGTTGCAAGCATGAAGTTGTTTTCATCTTATGGTTCTGCTGCTATTTGCTGCTACTGGCTGTTGCTCAGGAGGAGCTTGATATAACTGACCCCACTGAAGTTGAGGCATTGAATGCCATGAAGAAAAGTTTGATTGATCCTAATGGAAATTTGAGCAATTGGGACCAGGGAGACCCATGTACATCTAGCTGGACAGGAGTTGTGTGTTTTAACAAAACATTAGTGGATGGCTTTCTACATGTTCAAGAACTGCAACTGCTGAATTTGAATCTATCTGGAACTTTGGCACCAGATATTGGCAACTTAGCTTATCTGGAAATATTGAGTTTCATTTGGAACAACATAAGTGGGAGTATTCCGAAGGAAATAGGCAATATCAAATCTTTGCAAATTTTGCTCCTGAATGGAAATCAATTAACAGGTGCACTGCCAGAGGAGCTTGGATATCTTCCAAACCTATGGTTACTGCAAATTGATGAAAACCACATATCAGGACCTATACCAACATCATTTGCAAACCTGAACATGACAAGACACTTTCACATGAACAATAATTCACTTAGCGGGCAAATCCCACCAGAACTTTCCCGATTCCTTATTCACCTCCTTCTCGAGAACAACAACTTATCAGGATTTCTTCCTCCTGAGCTATCCAATATGCCAAACTTAAGTACACTTCAACTTGATAACAATAACTTCGGCGGAAATAGCATTCCGTACACTTATGGCAACATGTCAAAATTGTTGAAGTTGAGCCTTAGGAATTGCAACTTGAAAGGAACAATTCCTGAGTTAAGCAGGATACCACAACTTCTTTATCTTGATCTCAGTTCCAATCAGTTGAATGAATCAATTCCTCTTAATAAGCTCTCTGAAAATGTCACAACCATTATTATATCAAACAACAAACTTACAGGAACTATTCCATCCTACTTTTCTGGTCTTCCACGTCTCCAAAGAATGTCACTTGCAAACAATTCATTGGATGGCAGTGTTCCTTCCATCATTTGGCAGAACAGGACTTTAAATGGAACAGAAAGATTGAGCTTGGAGTTGGAAAATAATAAATTTACAACCATATCAGGAAGTATTGATCTTACCCCAAATATCACACTCTTGCTTGATGGGAATCCTTTATGCTCAAATAGTACCTTGGATCAGTTCTGTAAATCTGAAGGTGCCAATGACACAAATGACAAATTTCCAACAAACTCTAGTGACTCTTGTCCCACTCAATCATGCCCCCCTCCTTATGAATACTCAGTGCATTGTTTCTGTGCTGTCCCATTGCTCATTGGTTATCGACTGCAAACTCCTGCATTTTCATATTTTCCTCCATACATGATTAGATTTGAAGAATACCTGACTTCTGGTCTTAACATACACACCACTCAACTAAATCTTACTTTTCGGTGGCAAGTAGAACATCGACTGAGAATAAACTTAAAGATTTTTCCTGTATATGTTGATAGCAATAGTTCTCATACTTTCAATGGAAGTGAGGTCCTACGGATCATAAGCATTTTCAGAGGATTGAAAATTCCTAACGATGATTATTTTGGGCCTTATGAACTAATGGACTTGACTCTCCTGGATCCTTACAAGAAGGATGTAATTGACACCTCTTCAAAATCAGGCACAGGTACGGGGGCATTGGTTGGCATAATCTTAGGGTCAATTGCTTGTGCAGTGACATTGTCTACAATTGTTATTCTTTTTATATTAAGAATACGTTTGAGATATCGTCATGCAGTTTCCAAATCATGTCATTCATCTAAGATCTCAATTGATGGCGTAAGGACCTTTACTTTTGGAGAATTGTCCTCAGCTACAAACAATTTTAGCAACTCTGCTCAAGTTGGACAAGGGGGCTATGGGAAAGTTTATAAAGGTATTCTTTCTAATGGCACAGTTGTTGCAATAAAACGTGCACAGGAGGGATCACTACAAGGTGAGAAGGAGTTCCTCACAGAAATATCAATATTATCAAGGTTACATCATCGTAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAAGTCGAACAGATGCTGGTTTATGAATTTATGTCGAATGGCACACTAGGGGACCACCTTTCTGTTATGTCAGAAAAACCTCTGACTTTTGCTATGAGATTGAAGATAGCGCTAGGTTCAGCTAAAGGTCTTACATATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCTAAATTCACTGTAAAAGTGGCTGATTTTGGACTTTCAAGGCTTGCACCAGTTGCAGATATTGTAGGAATTGTGCCTGGTCATGTATCTACAACAGTAAAGGGGACCCCGGTCATGTTCAGCCTAGCAGATGTCTTCTTGGGCCAATTAAGATTAAGCATAACAAATGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGATGAAGCCTATCATACATGGAAAAAATATTATTAGAGAGGTTCATACTGCATACCGATCTGGTGTGATATTTTCAATTATTGATGGACGTATGGGGTCTTATCCACCTGAGCATGTGGAGAAATTTTTGAAGTTGGCCCTAAAGTGTTGTGAAGACAAGCCAGATGCACGTCCTAAAATGGTAGAGGTGGTTAGGGAGCTTGAAAACATATGGTCTGTGATGCCAGATTCAGATACTAGGAGAGCTGAAATTATAGCCATTGATTCTTGCCAAGATATCAATACATCTTCTTCATCCTCTGCTATAAGGACTCCTTTCGAATCAAGAGATGTGTCAGGTAGTAACCTTGTTAGCGGAGTAATATCAAGCATCATGCCAAGATAG 2868 0.3919 MVMYLSKGCKHEVVFILWFCCYLLLLAVAQEELDITDPTEVEALNAMKKSLIDPNGNLSNWDQGDPCTSSWTGVVCFNKTLVDGFLHVQELQLLNLNLSGTLAPDIGNLAYLEILSFIWNNISGSIPKEIGNIKSLQILLLNGNQLTGALPEELGYLPNLWLLQIDENHISGPIPTSFANLNMTRHFHMNNNSLSGQIPPELSRFLIHLLLENNNLSGFLPPELSNMPNLSTLQLDNNNFGGNSIPYTYGNMSKLLKLSLRNCNLKGTIPELSRIPQLLYLDLSSNQLNESIPLNKLSENVTTIIISNNKLTGTIPSYFSGLPRLQRMSLANNSLDGSVPSIIWQNRTLNGTERLSLELENNKFTTISGSIDLTPNITLLLDGNPLCSNSTLDQFCKSEGANDTNDKFPTNSSDSCPTQSCPPPYEYSVHCFCAVPLLIGYRLQTPAFSYFPPYMIRFEEYLTSGLNIHTTQLNLTFRWQVEHRLRINLKIFPVYVDSNSSHTFNGSEVLRIISIFRGLKIPNDDYFGPYELMDLTLLDPYKKDVIDTSSKSGTGTGALVGIILGSIACAVTLSTIVILFILRIRLRYRHAVSKSCHSSKISIDGVRTFTFGELSSATNNFSNSAQVGQGGYGKVYKGILSNGTVVAIKRAQEGSLQGEKEFLTEISILSRLHHRNLVSLIGYCDEEVEQMLVYEFMSNGTLGDHLSVMSEKPLTFAMRLKIALGSAKGLTYLHTEADPPIFHRDVKASNILLDSKFTVKVADFGLSRLAPVADIVGIVPGHVSTTVKGTPVMFSLADVFLGQLRLSITNDKSDVYSLGVVFLELLTGMKPIIHGKNIIREVHTAYRSGVIFSIIDGRMGSYPPEHVEKFLKLALKCCEDKPDARPKMVEVVRELENIWSVMPDSDTRRAEIIAIDSCQDINTSSSSSAIRTPFESRDVSGSNLVSGVISSIMPR* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02198 955 FunFam Leucine-rich repeat protein kinase family protein 586 696 - -
Rops11g02198 955 SMART serkin_6 621 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02198 955 Gene3D Phosphorylase Kinase; domain 1 592 696 - -
Rops11g02198 955 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Rops11g02198 955 SUPERFAMILY Protein kinase-like (PK-like) 606 918 IPR011009 -
Rops11g02198 955 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515
Rops11g02198 955 PANTHER RECEPTOR-LIKE PROTEIN 55 47 898 - -
Rops11g02198 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 38 199 - -
Rops11g02198 955 ProSiteProfiles Protein kinase domain profile. 621 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02198 955 Gene3D Transferase(Phosphotransferase) domain 1 697 916 - -
Rops11g02198 955 Gene3D Ribonuclease Inhibitor 299 386 IPR032675 -
Rops11g02198 955 SUPERFAMILY L domain-like 52 395 - -
Rops11g02198 955 Pfam Protein tyrosine and serine/threonine kinase 624 895 IPR001245 GO:0004672|GO:0006468
Rops11g02198 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Rops11g02198 955 Gene3D Ribonuclease Inhibitor 204 298 IPR032675 -
Rops11g02198 955 Gene3D Ribonuclease Inhibitor 37 203 IPR032675 -
Rops11g02198 955 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02198 Rops-Chr11 36580843 36601017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02198 16 908 Receptor kinase-like Gene Family AT5G01950 55.482 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g02198 PK_Tyr_Ser-Thr 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02198 - - gmx:100786467 1342.41