Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02187 ATGGTGATGTATCTTTCAAAGGGTTGCAAGCATGAAGTTGTTTTCATCTTATGGTTCTGCTGCTATTTGCTGCTTCTGGCTGTTGCTCAGGAGGAGCTTGATATAACTGACCCCACTGAAGTTGAGGCATTGAATGCCATAAAGAAAAGTTTGATTGATCCTAATGGAAATTTGAGCAATTGGGACCAGGGAGACCCATGTACATCTAGCTGGACAGGAGTTGTGTGTTTTAACAAAACATTAGTGGATGGCTTTCTACATGTTCAAGAACTGCAACTGCTGAATTTGAATCTATCTGGAACTTTGGCACCAGATATTGGCAACTTAGCTTATCTGGAAATATTGAGTTTCATTTGGAACAACATAAGTGGGAGTATTCCGAAGGAAATAGGCAATATCAAATCTTTGCAAATTTTGCTCCTGAATGGAAATCAATTAACAGGTGCACTGCCAGAGGAGCTTGGATATCTTCCAAACCTATGGTTACTGCAAATTGATGAAAACCACATATCAGGACCTATACCAACATCATTTGCAAACCTGAACATGACAAGACACTTTCACATGAACAATAATTCACTTAGCGGGCAAATCCCACCAGAACTTTCCCGATTACCAAGCCTTATTCACCTCCTTCTCGAGAACAACAACTTATCAGGATATCTTCCTCCTGAGCTATCCAATATGCCAAACTTAAGTACACTTCAACTTGATAACAATAACTTCGGCGGAAATAGCATTCCGGACACTTATGGCAACATGTCAAAATTGTTGAAGTTGAGCCTTAGGAATTGCAACTTGAAAGGACCAATTCCTGAGTTAAGCAGGATACCACAACTTCTTTATCTTGATCTCAGTTCCAATCAGTTGAATGAATCAATTCCTCTTAATAAGCTCTCTGAAAATGTCACAACCATTATTCTATCAAACAACAAACTTACAGGAACTATTCCATCCTACTTTTCTGGTCTTCCACATCTCCAGAGAATGTCACTTGCAAACAATTCATTGGATGGCAGTGTTCCTTCCATCATTTGGCAGAACAGGACTTTAAATGGAACAGAAAGATTGAGCTTGGAGTTGGAAAATAATAAATTTACAACCATATCAGGAAGTATTGATCTTCCCCCAAATATCACACTCTTTCTTGATGGGAATCCTTTATGCTCAAATAGTACCTTGGATCAGTTCTGTAAATCTGAAGGTGCCAATGACACAAATGATAAATTTCCAACAAACTCTAGTGACTCTTGTCCCACTCAATCATGCCCCCCTCCTTATGAATACTCAGTGCATTGTTTCTGTGCTGTCCCATTGCTCATTGGTTATCGACTGCAAACTCCTGCATTTTCAGATTTTCCTCCATACATGATTAGATTTGAAGAATACCTGACTTCTGGTCTTAACATACACACCACTCAACTAAATCTTACTTTTCGGTGGCAAGTAGGACATCGATTGAGAATAAACTTAAAGATTTTTCCTGTATATGTTGATAGCAATAGTTCTCATACTTTCAATGGAAGTGATGTCCTACGGATCATAAGCATTTTCAGAGGACTGAAAATTCCTAACGATGATTATTTTGGGCCTTATGAACTAATGGACTTGACTCTCCTGGATCCTTACAAGAAGGATGTAATTGACACCTCTTCAAAATCAGGCATAGGTACGGGGGCATTGGTTGGCATAATCTTAGGGTCAATTGCCTGTGCAGTGACATTGTCTACAATTGTTATTCTTTTTATATTAAGAATAAGATTGAGATATCGTCATGCAGTTTCCAAATCATGTCATTCATCTAAGATCTCAATTGATGGTATAAAGACCTTTACTTTTGGAGAATTGTCCTCAGCTACAAACAATTTTAGCAACTCTACTCAAGTTGGACAAGGGGGCTATGGGAAAGTTTATAAAGGTTACATCATCGTAACCTTGTGTCTCTCGATTGAATCTTGTGATGAAGAAGCTGAACAGATGCTGGTTTATGAATTTATGTCGAATGGCACACTAGGGGACCACCTTTCTGTTAAGTCAGAAAAACCTCTGACTTTTGCTATGAGATTGAAGATAGCTCTAGGGTCAGCTAAAGGTCTTACATATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCTAAATTCACTGTAAAAGTGGCTGATTTTGGACTTTCAAGGCTTGCACCAGTTGCAGATATTGTAGGAATTGTGCCTGGTCATGTATCTACAACAGTAAAAGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGATGAAGCCTATCATACATGGAAAAAATATTATTAGAGAGGTTCATGCTGCATACCGATCTGGTGTGATATTTTCAATTATTGATGGACGTATGGGGTCTTATCCACCTGAGCATGTGGAGAAATTTTTGATGTTGGCCCTGAAGTGTTGTGAAGACAAGCCAGATGCACGTCCTAAAATGGTAGAGGTGGTTAGGGAGCTTGAAAACATATGGTCTATGATGCCAGATTCAGATACTAAGAAAGCTGAAATTATAGCCATTGATTCTTGCCAAGATGTCAATACATCTTCTTCATCCTCTGCTATAAGGACTCCTTTCGAATCAAGAGATATGTCAGGTAGTTACCTTGTTAGCGGAGTAATATCAAGCATCATGCCAAGATAG 2760 0.3909 MVMYLSKGCKHEVVFILWFCCYLLLLAVAQEELDITDPTEVEALNAIKKSLIDPNGNLSNWDQGDPCTSSWTGVVCFNKTLVDGFLHVQELQLLNLNLSGTLAPDIGNLAYLEILSFIWNNISGSIPKEIGNIKSLQILLLNGNQLTGALPEELGYLPNLWLLQIDENHISGPIPTSFANLNMTRHFHMNNNSLSGQIPPELSRLPSLIHLLLENNNLSGYLPPELSNMPNLSTLQLDNNNFGGNSIPDTYGNMSKLLKLSLRNCNLKGPIPELSRIPQLLYLDLSSNQLNESIPLNKLSENVTTIILSNNKLTGTIPSYFSGLPHLQRMSLANNSLDGSVPSIIWQNRTLNGTERLSLELENNKFTTISGSIDLPPNITLFLDGNPLCSNSTLDQFCKSEGANDTNDKFPTNSSDSCPTQSCPPPYEYSVHCFCAVPLLIGYRLQTPAFSDFPPYMIRFEEYLTSGLNIHTTQLNLTFRWQVGHRLRINLKIFPVYVDSNSSHTFNGSDVLRIISIFRGLKIPNDDYFGPYELMDLTLLDPYKKDVIDTSSKSGIGTGALVGIILGSIACAVTLSTIVILFILRIRLRYRHAVSKSCHSSKISIDGIKTFTFGELSSATNNFSNSTQVGQGGYGKVYKGYIIVTLCLSIESCDEEAEQMLVYEFMSNGTLGDHLSVKSEKPLTFAMRLKIALGSAKGLTYLHTEADPPIFHRDVKASNILLDSKFTVKVADFGLSRLAPVADIVGIVPGHVSTTVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMKPIIHGKNIIREVHAAYRSGVIFSIIDGRMGSYPPEHVEKFLMLALKCCEDKPDARPKMVEVVRELENIWSMMPDSDTKKAEIIAIDSCQDVNTSSSSSAIRTPFESRDMSGSYLVSGVISSIMPR* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02187 919 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 666 875 - -
Rops11g02187 919 Pfam Leucine rich repeat 302 342 IPR001611 GO:0005515
Rops11g02187 919 SMART LRR_typ_2 277 302 IPR003591 -
Rops11g02187 919 SMART LRR_typ_2 324 348 IPR003591 -
Rops11g02187 919 SMART LRR_typ_2 229 253 IPR003591 -
Rops11g02187 919 SMART LRR_typ_2 205 228 IPR003591 -
Rops11g02187 919 SMART LRR_typ_2 133 157 IPR003591 -
Rops11g02187 919 SUPERFAMILY L domain-like 47 395 - -
Rops11g02187 919 ProSiteProfiles Leucine-rich repeat profile. 279 300 IPR001611 GO:0005515
Rops11g02187 919 Gene3D Phosphorylase Kinase; domain 1 594 659 - -
Rops11g02187 919 Pfam Protein tyrosine and serine/threonine kinase 651 859 IPR001245 GO:0004672|GO:0006468
Rops11g02187 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Rops11g02187 919 SUPERFAMILY Protein kinase-like (PK-like) 608 883 IPR011009 -
Rops11g02187 919 PANTHER RECEPTOR-LIKE PROTEIN 55 47 863 - -
Rops11g02187 919 ProSiteProfiles Protein kinase domain profile. 550 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02187 919 Gene3D Transferase(Phosphotransferase) domain 1 666 884 - -
Rops11g02187 919 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 38 199 - -
Rops11g02187 919 Gene3D Ribonuclease Inhibitor 297 420 IPR032675 -
Rops11g02187 919 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Rops11g02187 919 Gene3D Ribonuclease Inhibitor 36 296 IPR032675 -
Rops11g02187 919 SMART serkin_6 623 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02187 Rops-Chr11 36425101 36462763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02187 16 872 Receptor kinase-like Gene Family AT5G01950 52.928 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g02187 PK_Tyr_Ser-Thr 3.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02187 - - gmx:100786467 1290.4