Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02186 ATGAGACAATACCCACGAGGCTTCACTTCTCACTATTTCATTTTCACGTTGCTGCTTCACTCTCTTGGGAGAGAAAAAGTACCCTGCTTAGTTCATGAGAGATATTTAAGAGTTCTGGTGATGTATCTTTCAAAGGGTTGCAAGCATGAAGTTGTTTTCATCTTGTGGTTTTGCTGCTGTTTGCTACTGGCTGCCTCGCAGGATAATATCACTGACCCTTCTGAAGTTAAAGCATTGAAGACCATAAAGCAAAGTTTGATTGATCCTAATGGAAACTTGAGCAATTGGAATCGTGGAGACCCATGCACATCTCGCTGGACAGGAGTTTTGTGCTTCAATGAAACATTAGTGGATGGGTTTCTACATGTTCGAGAATTGCAACTACTGAATTTGAACTTGTCCGGAACTTTGGCACCAGATATTGGCAGCTTAGCTTATATGGAAATACTGAGCGTCATGTGGAACAACATAACTGGGAGTATTCCAAAGGAAATTGGCAATATCAAATCTTTACAACTCTTGCTCCTGAATGGAAATCAATTAACAGGTCCACTGCCAGAGGAGCTTGGCTATCTTCCAAATCTTGATAGAATACAAATTGATCAGAACCAAATATCAGGACCTGTACCTACATCATTTGCAAACCTGAACAAGACAAAGCACTTTCACATGAACAATAATTCACTTAGCGGGCAAATCCCACCGGAACTTTCGCGATTACCAAAACTTGTTCACCTCCTTCTTGACAACAACAACTTATCAGGATATCTTCCCCCTGAGCTGTCTGATTTGCCAAGCTTACTCATACTTCAACTTGATAACAATAACTTCGGTGGAAATAGCATTCCGGACACTTATGGCAACATGTCAAAATTGCTGAAGTTGAGCCTTAGGAATTGCAACTTGCAAGGACCAATTCCTGATTTGAGCAGGATATCACACCTTCTTTATCTTGACCTCAGTTCCAATCAGTTGAATGAATCAATTCCTCCGAATAAGCTTTCTGAAAATATCACAACCATTGATTTATCAAACAACAGTCTTACTGGAACTATTCCATCCTACTTTTCTAGTCTTCCACGTCTTCAGAAATTGTCACTTGCAAACAATTCATTGAATGGCAGTGTTCCTTCCACCATTTGGCAGAACAAGACTTTAAATGGAGCAGAAAGATTTCTCTTGGAGTTGGAAAATAATGAATTTACAACCATATCAGGCAGTACTGATCTTCCTCCAAATGTCACACTCTTGCTTGATGGGAATCCTCTATGCTCAAATAAGACCCTGGGTCAGTTCTGTAGATCTGAAGATGCTAGTGACACAAATGGCTCATTTTCAGCAAACTCCAGTGGCTCCTGTCGTGCTCAATCATGTCCACCTCCTTATGAATACTCTGTGGATTGTTTCTGTGCTGCCCCATTGCTTGTTGTTTATCGACTGAAAAGTCCTGGATTTTCAGATTTTCGTCCATACTTGAATACATTTCAGGAATACATGACTTCTGGTCTTAGTATACAAACCAATCAGCTCAACTATTCTTATCAGTGGCAAGCAGGACCTCGATTGAGAATGAACTTGAAGCTTTTTCCTGCATATGTTGGTAACAATAGCTCTCATATTTTCGATACAAGTGAGGTCCTTCGGATAAGAAGCATGTTCACAGGATGGAAAATTGATGACAGTGATTTGTTTGGGCCTTATGAACTGATTAACTTCATTCTCCTGGATCTTTACAAGGATGCGATTGGCACCTCTTCAAAATCAGGGATAGGTACAGGTGCACTAGTCGGCATAATCTTAGGGTCAATTGCTTGTGCAGTGGCATTGTCCGTGATTTTTACTCTTCTTATAGTAAGAACACAATTGAGAAAGCATCATGCAGTTTCCAGACGACGTCATGCATCTAAAATCTCAATAAAAATTGATGGCGTAAGATCTTTTACTTATGGAGAATTGACCTCCGCTACAAACAATTTTAGCAACTCTGCTCAAGTTGGACAAGGGGGCTACGGGAAGGTTTATAAAGGTATTCTTTCTGATGGCACAGTTGTTGCCATAAAACGTGCACAGGAGGGATCACTGCAAGGTGAAAAGGAGTTCCTAACAGAAATATCATTACTATCAAGGTTACATCATCGTAACCTTGTGTCTCTGATCGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCAAATGGCACACTAAGGGATCACCTTTCTGTTACATCAAAAGAACCTCTGACGTTTGCCATGAGGTTGAAAATTGCACTAGGGTCAGCTAAAGGTCTTCTGTATCTACACACAGAAGCTGATCCTCCAATATTTCACCGAGATGTCAAGGCCAGCAACATATTATTGGACCCTAAGTTTTCTGCCAAAGTGGCAGATTTTGGACTTTCACGGCTTGCGCCGGTTCCAGATATTGAAGGAATTGTGCCTGGTCATGTATCTACAGTGGTAAAGGGAACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCACAAGTTGACTGACAAGAGTGATGTTTATAGTCTCGGGGTTGTATTTCTGGAACTTTTGACTGGGATGCAACCTATCTCACATGGCAAAAATATTGTTAGAGAGGTTCATGTTGCATTCCAATCTGGTGTGGTATTTTCAATTATTGATGGACGCATGGGGTCTTATCCATCTGAACATGTGGAGAAATTTTTGAATTTGGCCTTGAAGTGCTGTGAAGATGATCCAGAAACACGTCCTAATATGGCAGAAGTGGTTAGGGAGCTTGAAAACATGTGGTCTATGATGCCAGAATCAGATACCAGGAGAGCTGAATTTATAATATCCAGTGATTCTAGCAAAACAGTTAGTACACCATCTTCATCATCTGCTATAAAGACTCCTTTTGTATCAGGAGATGTGTCAGGTAGTGATCTTGTTAGTGGAGTAATACCAAGCATCAAACCAAGATAG 2970 0.4067 MRQYPRGFTSHYFIFTLLLHSLGREKVPCLVHERYLRVLVMYLSKGCKHEVVFILWFCCCLLLAASQDNITDPSEVKALKTIKQSLIDPNGNLSNWNRGDPCTSRWTGVLCFNETLVDGFLHVRELQLLNLNLSGTLAPDIGSLAYMEILSVMWNNITGSIPKEIGNIKSLQLLLLNGNQLTGPLPEELGYLPNLDRIQIDQNQISGPVPTSFANLNKTKHFHMNNNSLSGQIPPELSRLPKLVHLLLDNNNLSGYLPPELSDLPSLLILQLDNNNFGGNSIPDTYGNMSKLLKLSLRNCNLQGPIPDLSRISHLLYLDLSSNQLNESIPPNKLSENITTIDLSNNSLTGTIPSYFSSLPRLQKLSLANNSLNGSVPSTIWQNKTLNGAERFLLELENNEFTTISGSTDLPPNVTLLLDGNPLCSNKTLGQFCRSEDASDTNGSFSANSSGSCRAQSCPPPYEYSVDCFCAAPLLVVYRLKSPGFSDFRPYLNTFQEYMTSGLSIQTNQLNYSYQWQAGPRLRMNLKLFPAYVGNNSSHIFDTSEVLRIRSMFTGWKIDDSDLFGPYELINFILLDLYKDAIGTSSKSGIGTGALVGIILGSIACAVALSVIFTLLIVRTQLRKHHAVSRRRHASKISIKIDGVRSFTYGELTSATNNFSNSAQVGQGGYGKVYKGILSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSVTSKEPLTFAMRLKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDPKFSAKVADFGLSRLAPVPDIEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVHVAFQSGVVFSIIDGRMGSYPSEHVEKFLNLALKCCEDDPETRPNMAEVVRELENMWSMMPESDTRRAEFIISSDSSKTVSTPSSSSAIKTPFVSGDVSGSDLVSGVIPSIKPR* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02186 989 Pfam Leucine rich repeat 193 253 IPR001611 GO:0005515
Rops11g02186 989 Pfam Leucine rich repeat 337 383 IPR001611 GO:0005515
Rops11g02186 989 FunFam Leucine-rich repeat protein kinase family protein 623 734 - -
Rops11g02186 989 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 735 944 - -
Rops11g02186 989 SMART serkin_6 659 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02186 989 ProSiteProfiles Protein kinase domain profile. 659 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02186 989 SUPERFAMILY Protein kinase-like (PK-like) 644 959 IPR011009 -
Rops11g02186 989 SUPERFAMILY L domain-like 85 430 - -
Rops11g02186 989 ProSitePatterns Protein kinases ATP-binding region signature. 665 687 IPR017441 GO:0005524
Rops11g02186 989 Gene3D Ribonuclease Inhibitor 336 422 IPR032675 -
Rops11g02186 989 PANTHER RECEPTOR-LIKE PROTEIN 55 82 932 - -
Rops11g02186 989 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 333 462 - -
Rops11g02186 989 Pfam Leucine rich repeat N-terminal domain 73 111 IPR013210 -
Rops11g02186 989 Gene3D Phosphorylase Kinase; domain 1 629 734 - -
Rops11g02186 989 Gene3D Transferase(Phosphotransferase) domain 1 735 952 - -
Rops11g02186 989 Pfam Protein kinase domain 660 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02186 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Rops11g02186 989 Gene3D Ribonuclease Inhibitor 227 335 IPR032675 -
Rops11g02186 989 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 73 234 - -
Rops11g02186 989 Gene3D Ribonuclease Inhibitor 73 226 IPR032675 -
Rops11g02186 989 SMART LRR_typ_2 168 192 IPR003591 -
Rops11g02186 989 SMART LRR_typ_2 312 336 IPR003591 -
Rops11g02186 989 SMART LRR_typ_2 359 383 IPR003591 -
Rops11g02186 989 SMART LRR_typ_2 240 263 IPR003591 -
Rops11g02186 989 SMART LRR_typ_2 264 288 IPR003591 -
Rops11g02186 989 CDD STKc_IRAK 665 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02186 Rops-Chr11 36354228 36368031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02186 54 941 Receptor kinase-like Gene Family AT5G01950 59.956 0.0 1026
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops11g02186 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02186 - - gmx:100786467 1495.72