Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02170 ATGGAACAACCCAGATTCCGGTTTCTCCTTCCTCCGCTATTCTTCTTCTTCATGGCTTCACTTCCTTTCATTGCAGAATCCCAATGCTCACGGGGTTGTCCACTAGCTCTTGCCTCCTACTACGTACAAGATGGCATCAACCTCACTTATATTTCAACACCCGATGTCATAGTCAACTACAACAAAGCCATAATACCAAACAAAGACAGTGTCCCATCCTCCACAAGGATCAACGTTCCATTCCCATGTGAATGCATCAATGGTGAGTTCCTTGGTCACACGTTTCAGTATGATGTTCAGACAGGGGACACGTACGAGATAGTTGCTGGAACCAACTATGCAAACCTGACCAACGTTCAATGGTTGAGGAACTTCAATAGCTACCCTCCCAATAACATTCCCGACACGGGAACACTTAATGTTACCATTAATTGTTCTTGTGGTAACAGTGATGTCGCGAATTATGGGTTGTTCATCACTTACCCTCTTAGGCCTGGACAGACTTTGGGGTCTGTGGCTAATGAAACGAACCTTGACACGGGGTTGCTGCAGATGTACAATCCTGGTGTTAATTTCAACCAAGGGAGTGGCCTGGTTTATATTCCAGGAAAAGATCAAAATGATAGCTATGTGTTTTTGGGGTCCAGTTCAGGAGGTCTTGCTGGTGGGCCTATTGCTGGAATAGCAGTTGGAGTAGTGGCTGGTCTTTTGTTATTGATAGTTTGTATCTATGTTGGATATTTCCGGAAGAAGAAGATACAGAAGGAGGAACTTCTTCCACAAGAATCTAATGCACTCTTTGCTCAAGATGGGAAGGATGAAACTTCTCGTAGTGCTGCAAATGAAACTTCAGGGTCTGGTGGTCCTGCAGCAATCACAGGCATAACAGTGGAAAAATCAGTGGAGTTCTCATATCAGGAACTAGCAACTGCCACGGATAACTTTAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGCGCTGTCTACTATGCAGAGCTGAGAGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAGTTGAAAGTCCTGACACGTGTTCATCATCTTAACCTGGTGCGATTGATTGGATATAGTACTGAGGGCTCCCTTTTCCTTGTCTATGAATACATTGAGAACGGAAACATAAGTCAACATCTGCGTGGTTCAGGTAGAGATCCACTACCATGGGCTACACGGGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCACCGTGACATAAAGTCGGCAAATATATTAATAGACAAAAACTTCCGGGGGAAGGTTGCTGATTTTGGATTGACCAAACTGACAGAAGTTGGAAGCTCATCACTTCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTGTTTGCTTTTGGAGTTGTTCTTTATGAACTTATTTCAGCTAAGGAAGCAATAGTCAAGACAAGTGAATCTGTTGCTGACTCAAAGGGCCTCGTAGATTTGTTTGATGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTCGCAAACTAGTGGATCCAAGGCTTGGGGATAACTACCCTATTGATTCAGTTCGCAAGATGGCTCAACTAGCCAAAGCATGTACACAGGACAATCCACAACTGCGTCCAAGTATGAGATCAATTGTGGTTGCTCTTATGACTCTTTCTTCAACTACTGATGATTGGGATGTTGGCACCTTCTACGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAGATAG 1845 0.4331 MEQPRFRFLLPPLFFFFMASLPFIAESQCSRGCPLALASYYVQDGINLTYISTPDVIVNYNKAIIPNKDSVPSSTRINVPFPCECINGEFLGHTFQYDVQTGDTYEIVAGTNYANLTNVQWLRNFNSYPPNNIPDTGTLNVTINCSCGNSDVANYGLFITYPLRPGQTLGSVANETNLDTGLLQMYNPGVNFNQGSGLVYIPGKDQNDSYVFLGSSSGGLAGGPIAGIAVGVVAGLLLLIVCIYVGYFRKKKIQKEELLPQESNALFAQDGKDETSRSAANETSGSGGPAAITGITVEKSVEFSYQELATATDNFSMANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSTEGSLFLVYEYIENGNISQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVFAFGVVLYELISAKEAIVKTSESVADSKGLVDLFDGVLSQPDPTEDLRKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGTFYENQNLVNLMSGR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02170 614 Pfam Protein tyrosine and serine/threonine kinase 317 585 IPR001245 GO:0004672|GO:0006468
Rops11g02170 614 ProSiteProfiles Protein kinase domain profile. 315 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02170 614 FunFam PTI1-like tyrosine-protein kinase 3 386 600 - -
Rops11g02170 614 CDD STKc_IRAK 321 583 - -
Rops11g02170 614 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Rops11g02170 614 Gene3D Transferase(Phosphotransferase) domain 1 386 605 - -
Rops11g02170 614 SMART serkin_6 315 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02170 614 Gene3D Phosphorylase Kinase; domain 1 291 385 - -
Rops11g02170 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Rops11g02170 614 FunFam LysM receptor kinase 2 294 385 - -
Rops11g02170 614 SUPERFAMILY Protein kinase-like (PK-like) 297 586 IPR011009 -
Rops11g02170 614 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 14 599 IPR044812 GO:0019199|GO:0045087
Rops11g02170 614 MobiDBLite consensus disorder prediction 269 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02170 Rops-Chr11 36005389 36014325 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02170 9 614 Receptor kinase-like Gene Family AT3G21630 58.494 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops11g02170 PK_Tyr_Ser-Thr 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02170 - K13429 gmx:100777781 966.066