Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02167 ATGGAACAACCCAGATTCGGGTTTCTCCTTCCTCTGCTATTCTTCTTCTTCTTCATGGCTTCACTTCCTTTCATTGCAGAATCCCAATGCTCACGGGGTTGTGCACTAGCTCTTGGCTCCTACTACATACAAGACGGCATAAACCTCACTTATATTTCAAAAATTATGCCATCCAATGTTCTTACAACACCTGATGACATAGTCAACTACAACAAAGCCATAATACCAAACAAAGACAGTGTCCAATCCTTCATAAGGATCAACGTTCCATTCCCATGTGACTGCATCAATGGTGAGTTCCTTGGTCACACGTTTCAGTATGATGTTCAGACAGGGGACACGTACGCGAAAGTTGCTGGAACCAACTATGCAAACCTGACAAACGTTCAATGGTTGAGGAACTTCAATAGCTACCCTTCCAATAACATTCCCGACACGGGAACACTTAATGTTACCATTAATTGTTCTTGTGGTAACAGTGATGTCGCGAATTATGGGTTGTTCATCACTTACCCTCTTAGGCCTGGAGAGACTTTGGGGTCTGTGGCTAGTGAAACGAACCTTGACTCGGGGTTGCTGCAGAGGTACAATCCTGGTGTTAATTTCAACCAAGGGAGTGGCCTGGTTTATATTCCAGGAAAAGATCAAAATGATAGCTATGTGTTTTTGGGGTCCAGTTCAGGAGGTCTTCCTGGTGGGGCTATTGCTGGAATAGCTGTTGGAGTAGTGGCTGGTCTTTTGTTATTGATAGTTTTTATCTATGTTGGATATTTCCGGAAGAAGATACAGAAGGAGGAACTTCTTCCACAAGATTCTACTGCACTCTTTGCTCAAGATGGGAAGGATGAAACTTCTCGTAGTGCTGCAAATGAAACTTCAGGGTCTGGTGGTCCTGCAGCAATCACAGGCATAACAGTGGACAAATCAGTGGAGTTCTCATATCAGGAACTAGCAACTGCCACGGATAACTTTAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGCGCTGTCTACTATGCAGAGCTGAGAGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAGTTGAAAGTCCTGACACGTGTTCATCATCTTAACCTGGTGCGATTGATTGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAACGGAAACATAAGTCAACATCTGCGTGGTTCAGGTAGAGATCCACTACCATGGGCTACACGGGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCACCGTGACATAAAGTCGGCAAATATATTAATAGACAAAAACTTCCGGGGGAAGGTTGCTGATTTTGGATTGACCAAACTGACAGAAGTTGGAAGCTCATCACTTCCCACTGGTCGTCTTGTTGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTGTTTGCTTTTGGAGTTGTTCTTTATGAACTTATTTCAGCTAAGGAAGCAATAGTCAAGACAAGTGAATCTGTTGCTGACTCAAAGGGCCTCGTAGCTTTGTTTGATGGAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTTGCAAACTAGTGGATCCAAGGCTTGGGGATAACTACCCTATTGATTCAGTTCGCAAGATGGCTCAACTAGCCAAAGCATGTACACAGGACAATCCACAACTGCGTCCAAGTATGAGATCAATTGTGGTTGCTCTTATGACTCTTTCTTCAACTACTGATGATTGGGATGTTGGCACCTTCTACGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAGATAG 1872 0.4284 MEQPRFGFLLPLLFFFFFMASLPFIAESQCSRGCALALGSYYIQDGINLTYISKIMPSNVLTTPDDIVNYNKAIIPNKDSVQSFIRINVPFPCDCINGEFLGHTFQYDVQTGDTYAKVAGTNYANLTNVQWLRNFNSYPSNNIPDTGTLNVTINCSCGNSDVANYGLFITYPLRPGETLGSVASETNLDSGLLQRYNPGVNFNQGSGLVYIPGKDQNDSYVFLGSSSGGLPGGAIAGIAVGVVAGLLLLIVFIYVGYFRKKIQKEELLPQDSTALFAQDGKDETSRSAANETSGSGGPAAITGITVDKSVEFSYQELATATDNFSMANKIGQGGFGAVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNISQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVFAFGVVLYELISAKEAIVKTSESVADSKGLVALFDGVLSQPDPTEDLCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGTFYENQNLVNLMSGR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02167 623 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Rops11g02167 623 FunFam LysM receptor kinase 2 303 394 - -
Rops11g02167 623 FunFam PTI1-like tyrosine-protein kinase 3 395 609 - -
Rops11g02167 623 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 608 IPR044812 GO:0019199|GO:0045087
Rops11g02167 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Rops11g02167 623 Gene3D Transferase(Phosphotransferase) domain 1 395 614 - -
Rops11g02167 623 MobiDBLite consensus disorder prediction 279 300 - -
Rops11g02167 623 Gene3D Phosphorylase Kinase; domain 1 300 394 - -
Rops11g02167 623 SUPERFAMILY Protein kinase-like (PK-like) 306 595 IPR011009 -
Rops11g02167 623 ProSiteProfiles Protein kinase domain profile. 324 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02167 623 Pfam Protein tyrosine and serine/threonine kinase 326 594 IPR001245 GO:0004672|GO:0006468
Rops11g02167 623 SMART serkin_6 324 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02167 Rops-Chr11 35976143 35986732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02167 5 623 Receptor kinase-like Gene Family AT3G21630 57.188 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Rops11g02167 PK_Tyr_Ser-Thr 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02167 - K13429 gmx:100777781 1002.28