Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02165 ATGGAGACACCAAATTTTTCAGGGAGCCGAAAAGTTGAGCGGCTAGATCTTACAGGGTGCATAAACCTATCTTGGGTCCATCCATCAATTGGACTTCTTGAAAAACTTGCTTTCTTGAGTTTGGAAGGTCAGAAAGGGCTTGGTCACCTTGATCTTGGCACTACAGAAAATTTATATTCTTTGAAAGTTCTACACCTCTCTGGCTGCACTAAACTTGGAAGCACACCAAATTTTACAGGGGTCTCGAATCTTGAGTACCTTGATATTGATCAATGTTCGAGTTTATCAATGGTTGATCAATCTATTGGGGATCTTACTGAGCTTAAATTCTTGAGTTTGAGAGACTGCACAAATCTTGTCAGTATACCCAAAAGTGTCAATACTATGACATCTCTTATAACTCTAGATTTATGCGGCTGCTTAAAACTAGAGAATCTACCCTTGCTTGGACAGGAATTCAGGTCTTCTTACTATCTGGGTTCTTTGATTTTTTTGGACTTAAGCTTTTGCAATCTAAGTAAAGTCCCTGAAGCTATTGCATTGTTAAGGTGTTTAGAAAGGCTAAATTTAGAAGGAAACAACTTTTTTTCGTTACCGTCTTCCATGGGGCGTCTTTCCAGGCTAGCATATTTAAACTTGGCGCATTGTAAGAGGCTTCAATATTTGCCTGATCTACAATTGTGTGCTACTGCTTCATCAGGGGGAAGGTATTTTAAAACCGTATCTGGATCTCATCATCATAGGTCAGGGTTATATGTTTTCAACTGTTCCTTCTTGGAGATCCCAGAAGAAGGTCCAAATTTGGCACTTTTGTGGTTAGAAAGATTAATAAAGAATCCTTGTCACTTCCGGTGTGGCTTTGACATTGTCGTTCCTGGGAACATAATTCCACAATGGTTTGATCATCAATTTATGGGAGGTTCAACAGTAAGGATAATGGACACTGTGTATGAGTATGACAATTGGCTTGGCTTTGCCTTTTGTGTGACATTTGAGGAAAACTACCATCCAACAATGTCTAGTTCTTCACATTATTCATTTCCCTCAATGTTGCCACGTCCTATCTATCTTTCTTTTGAAAGTGAACACACAGAAGAAACCTTCGATTGGCCACTTCAACTAGATTACAAGGTTGATGGCTCAAATTCAGAACATCTTTGGCTAATCTATATCTCTCGGCCACATTGCCATTTTGTGACTACAGGAGCACATATCATGTTTAAAACTTGTCCAGGTTTGGAAATAAAAAAATGGGGGTTACACATGGTATTCGAGCAAGATATCTTCAAACCACTAAAAATTGTTGAGGTTAATCGAATAGACAATATTCACTTGGATTTTGTACATGAAAGTAGCAGCAGCAGCAGCAGCTCTGGGTCTAGATTACAGCTTCCCTACAATTGGTATGTTACCGAGAGAGAAGAAAACGAGAACATGGAAGTGAATTCCAGAAAACATAATCTCTCTAATATGGGCCTATCTGATCTCCCTAATATGGACCTTTATAAATTACCTTACCCGAGGGAATCATCCTTCTTTTAA 1542 0.3891 METPNFSGSRKVERLDLTGCINLSWVHPSIGLLEKLAFLSLEGQKGLGHLDLGTTENLYSLKVLHLSGCTKLGSTPNFTGVSNLEYLDIDQCSSLSMVDQSIGDLTELKFLSLRDCTNLVSIPKSVNTMTSLITLDLCGCLKLENLPLLGQEFRSSYYLGSLIFLDLSFCNLSKVPEAIALLRCLERLNLEGNNFFSLPSSMGRLSRLAYLNLAHCKRLQYLPDLQLCATASSGGRYFKTVSGSHHHRSGLYVFNCSFLEIPEEGPNLALLWLERLIKNPCHFRCGFDIVVPGNIIPQWFDHQFMGGSTVRIMDTVYEYDNWLGFAFCVTFEENYHPTMSSSSHYSFPSMLPRPIYLSFESEHTEETFDWPLQLDYKVDGSNSEHLWLIYISRPHCHFVTTGAHIMFKTCPGLEIKKWGLHMVFEQDIFKPLKIVEVNRIDNIHLDFVHESSSSSSSSGSRLQLPYNWYVTEREENENMEVNSRKHNLSNMGLSDLPNMDLYKLPYPRESSFF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02165 513 Gene3D Ribonuclease Inhibitor 4 155 IPR032675 -
Rops11g02165 513 Gene3D Ribonuclease Inhibitor 156 283 IPR032675 -
Rops11g02165 513 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 55 147 - -
Rops11g02165 513 SUPERFAMILY L domain-like 4 283 - -
Rops11g02165 513 SMART LRR_typ_2 159 181 IPR003591 -
Rops11g02165 513 SMART LRR_typ_2 182 205 IPR003591 -
Rops11g02165 513 Pfam C-JID domain 291 428 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02165 Rops-Chr11 35921327 35922950 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02165 54 224 WRKY Transcription Factor Family AT4G12020 35.465 4.88e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02165 - - psat:127091204 631.713