Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02162 ATGGACTCCAAGTCAAAATTTTCAGATATGCTACTATTCTGGAGATCCTTCCTCCCGCGACCGTTTTGGGCCTTGTTGGGTCGTCGGTCATCTTCCGATTTGAGTCAAGGAGATGCAACTTCCAAATCTTCCATGCATTCCAATAGCATCCTAAACTATAAATACGATGTGTTTATCAGTTTCAGAGGTCCCGATACCCGCAACACTTTCGTTGATCATCTTTACAATCATCTCATCCGTAAAGGTATTTTTGCCTTCAAGGATGACAAAAGGCTCCAGAAAGGAGAATCCATTTCACCCCAGCTTATACAAGCAATTAAAAGTTCACGGGTTTCTATTGTTGTCTTCTCAAAAACATATGCTCAGTCGACATGGTGTTTGGATGAAATGGCTACAATTGCAGAATGCCATCAAGAATTGAAACAAACTGTTTTCCCTGTTTTCTATGATGTGGATCCATCTCATGTACGAAACCAGAATGGGGTGTACGAGAATGCCTTTGTTTTACACACATTGAAATACGAAGGCAAGGGAACGAATAAGGTTAAAGCCATAATTCTAGATCAAAAAGAGGATATTTCTGAATGTCCTAAGTTGAGAGCCGAAGGATTGTCAACAATGAGGGGCCTTATAATTCTTATAATATATCATAAGAATTTTTCAGGAAGCCTCTATTTTCTTTCTAACAGCTTACGGTATCTTCAATGGCATGGTTATCCTTTTGCTTCTTTGCCTTTCCAATTTGAGCCGTATCGTCTTGTGGAATTGAATATGCCTTATAGCAACATCCAACAACTATGGGAAGGTCGCAAGGATCTCCCCTATTTGAAAAGCGTGGATCTGAGCAACTCCAAATATCTTATGGAGACACCAAATTTTTCAGGGAGCCGAAAAGTTGAGCGGCTAGATCTTACAGGGTGCATAAACCTATCTTGGGTCCATCCATCAATTGGACTTCTTGAAAAACTTGCTTTCTTGAGTTTGGAAGGCTGTAGCAGTTTGGTCAGCCTTGATCTTGGCACTACAGAAAATTTATATTCTTTGAAAGTTCTTCACCTCTCTGGCTGCACTAAACTTGGAATTACACCAGATTTTACAACGGTCTCAAACCTTGAGTACCTTGATATTGATCAATGTATGAGTTTATCAGCCGTTGATCAATCCATTGGGGATCTTACAGAGCTTAAATTCTTGAGTTTGAGAGACTGCACAAATCTCATCAGCATACCCGAAAGTGTTAATTCTATGACATCTCTTGTAACTCTAGATTTATGCGGCTGCTTAAAACTAGAGAATCTACCCTTGCTTGGACAGGAATTCAGGTCTTCTTACTATCTGGGTTCTTTGATTTTTTTGGACTTAAGCTTTTGCAATCTAAGTAAAGTCCCTGAAGCTATTGCATTGTTAAGGTGTTTAGAAAGGCTAAATTTAGAAGGAAACAACTTTTTTTCGTTACCGTCTTCCATGGGGCGTCTTTCCAGGCTAGCATATTTAAACTTGGCGCATTGCAAGAGGCTTCAATATTTGTCTGATCTACAATTGTGTGCTACTGCTTCATCAGGGGGAAGGTATTTTAAAACCGTATCTGGATCTCATCATCATAGGTCAGGGTTATATGTTTTCAACTGTTCCTTCTTGGAGATCCCAGAAGAAGGTCCAAATTTGGCACTTTTGTGGTTAGAAAGATTAATAAAGAATCGTTGTCACTTCCGGTGTGGCTTTGACATTGTCGTTCCTGGGAACATAATTCCACAATGGTTTGATCATCAATTTATGGGAGGTTCAACAGTAAGGATAATGGACACTGTGTATGAGTATGACAATTGGCTTGGCTTTGCCTTTTGTGTGACATTTGAGGAAAACTATCATCCAACAATGTCTAGTTCTTCACATTATTCATTTCCCTCAATGTTGCCACGTCCTATCTATCTTTCTTTTGAAAGTGAACACACAGAAGAAACCTTCGATTGGCCACTTCAGCTAGATTACAAGGTTGATGGCTCAAATTCAGAACATCTTTGGCTAATCTATATCTCTCGGCCACATTGCCATTTTGTGACTACAGGAGCACATATCACGTTTAAAACTTGTCCAGGTTTGGAAATAAAAAAATGGGGGTTACACATGGTATTCGAGCAAGATATCTTCAAACCACTGAAAAATGTTGAGGTTAATCGAATAGACAATCTTCACTTGGATTTTGTACATGAAAGTAGCAGCAGCTCCGGAATCCAGCTTACTGACAATGTGCATGAAAGCAGCAACAGCTCTAGATTACAGCTTCCCTACAATTGGATTAGATTAGATTAA 2310 0.3944 MDSKSKFSDMLLFWRSFLPRPFWALLGRRSSSDLSQGDATSKSSMHSNSILNYKYDVFISFRGPDTRNTFVDHLYNHLIRKGIFAFKDDKRLQKGESISPQLIQAIKSSRVSIVVFSKTYAQSTWCLDEMATIAECHQELKQTVFPVFYDVDPSHVRNQNGVYENAFVLHTLKYEGKGTNKVKAIILDQKEDISECPKLRAEGLSTMRGLIILIIYHKNFSGSLYFLSNSLRYLQWHGYPFASLPFQFEPYRLVELNMPYSNIQQLWEGRKDLPYLKSVDLSNSKYLMETPNFSGSRKVERLDLTGCINLSWVHPSIGLLEKLAFLSLEGCSSLVSLDLGTTENLYSLKVLHLSGCTKLGITPDFTTVSNLEYLDIDQCMSLSAVDQSIGDLTELKFLSLRDCTNLISIPESVNSMTSLVTLDLCGCLKLENLPLLGQEFRSSYYLGSLIFLDLSFCNLSKVPEAIALLRCLERLNLEGNNFFSLPSSMGRLSRLAYLNLAHCKRLQYLSDLQLCATASSGGRYFKTVSGSHHHRSGLYVFNCSFLEIPEEGPNLALLWLERLIKNRCHFRCGFDIVVPGNIIPQWFDHQFMGGSTVRIMDTVYEYDNWLGFAFCVTFEENYHPTMSSSSHYSFPSMLPRPIYLSFESEHTEETFDWPLQLDYKVDGSNSEHLWLIYISRPHCHFVTTGAHITFKTCPGLEIKKWGLHMVFEQDIFKPLKNVEVNRIDNLHLDFVHESSSSSGIQLTDNVHESSNSSRLQLPYNWIRLD* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02162 769 SUPERFAMILY L domain-like 206 572 - -
Rops11g02162 769 Gene3D - 52 196 IPR035897 -
Rops11g02162 769 Gene3D Ribonuclease Inhibitor 197 332 IPR032675 -
Rops11g02162 769 Pfam C-JID domain 578 715 IPR045344 -
Rops11g02162 769 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 344 520 IPR044974 GO:0006952
Rops11g02162 769 SMART LRR_typ_2 469 492 IPR003591 -
Rops11g02162 769 SMART LRR_typ_2 446 468 IPR003591 -
Rops11g02162 769 Pfam TIR domain 54 174 IPR000157 GO:0007165
Rops11g02162 769 Gene3D Ribonuclease Inhibitor 342 442 IPR032675 -
Rops11g02162 769 Gene3D Ribonuclease Inhibitor 443 575 IPR032675 -
Rops11g02162 769 ProSiteProfiles TIR domain profile. 53 186 IPR000157 GO:0007165
Rops11g02162 769 FunFam Disease resistance protein (TIR-NBS-LRR class) 51 186 - -
Rops11g02162 769 SMART till_3 54 210 IPR000157 GO:0007165
Rops11g02162 769 Pfam Leucine Rich Repeat 253 269 IPR011713 -
Rops11g02162 769 SUPERFAMILY Toll/Interleukin receptor TIR domain 44 174 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02162 Rops-Chr11 35876670 35884012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02162 341 511 WRKY Transcription Factor Family AT4G12020 34.884 1.76e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02162 - - psat:127091204 766.533