Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02161 ATGGCTTCTGGCTACAACAAAGGCACTGCTCTTGATGCTATGATTATTATCACTTCTGTTCTTTTCTATATTGTTTTCTCTGCCACTAATCCCAAGAGAAACACCAGTGACCATATCCTTGTTTTGGCTCCATTGCCTATTGGTTTTTCTGTTTTCATGGTTCACCTGGCTACCATACCCATCACTGGTATTGAGATTAACCCGCTAGGAGCTTTGGTGCTGCTGTTATCTTCAACAATGGCAAAGTTTGGGATGACCACCTATGCCTTTTTCTTTCCCATGCAAATTAAACAAGATTATAATAAATTAACTAACGTGCATGTTCATTTTATTTTAATTAACTCACGAGGTTGGGTTTTATGTCTGGTTGCAATGGATCTTCTGGGTTGGTCCATTTGTGGGAACGTTGGCAACAACTGCATACCACCAGTACATCTTAAGAGCAGCAGCTATAAAGGCATTGGGATCCTTCCGAAGCAATCCCACCAACTAATGAAGACAAAAGAACAATGA 513 0.4035 MASGYNKGTALDAMIIITSVLFYIVFSATNPKRNTSDHILVLAPLPIGFSVFMVHLATIPITGIEINPLGALVLLLSSTMAKFGMTTYAFFFPMQIKQDYNKLTNVHVHFILINSRGWVLCLVAMDLLGWSICGNVGNNCIPPVHLKSSSYKGIGILPKQSHQLMKTKEQ* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02161 170 Gene3D Glycerol uptake facilitator protein. 1 132 IPR023271 -
Rops11g02161 170 PRINTS Major intrinsic protein family signature 13 31 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g02161 170 PRINTS Major intrinsic protein family signature 48 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g02161 170 Pfam Major intrinsic protein 2 69 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops11g02161 170 SUPERFAMILY Aquaporin-like 3 79 IPR023271 -
Rops11g02161 170 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 73 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02161 Rops-Chr11 35854803 35857245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02161 1 74 Major Intrinsic Protein MIP AT5G60660 69.231 2.39e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02161 K09872 - zof:121983923 100.523