Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02159 ATGGATTTTGGAGTAGGAAACAACACATTGTTATGCCAAGATCATCACAGCTTTTATCACAAGAGTATCTGGAACTCTGGCAACCCACTCGATTCCCCAACTTCTCTTCTTTATTTGCAGGTGTTCCTTTTTACTATAGTCACACAGTTCTTGGATGTTTGTCTCAAGCCCCTAAGACAATCCTCCCTTGTGTCCCAAATTCTTGGTGGAGTGGTATTTGGCCCATCAGTTTTGGGGCAACAAAAGATGCTGGCGAACACCTTGTTCCCTTTAAGAAGTTTTACAGTGCTTAAGACAACTTCATCATTTGGCCTTATGTTCTTCTACTTCATATGTTCTGTGAAGATGGATCCTGTCTCAATACTAAGGATAGAAAAGAAGGCAATCACTATTGGTCTTTCTGTATTCTTATCAACATTTGCATTCCCTACTGGAATGTCCTTATTGTTGAAGAAATATGTTTCCATGGACAAGAGCCTATCAGATTCTCTACTACCCATAGCATTCTCACAAACCTTAACTGTGTTTATTAGCATATCAGTCCTCCTAACAGAGATAAAAGCCCTTAACACTGACATTGGTCGTCTAACCATGTCCTCCGCATTGTTTGCTGATATTATTTGCTTTGGTTCAGCAGTGATTATATTTACATTTTTGGAGAATAGGAGTGGTAATATGTTGACACTACTATGGATGATTCTATCAGTAGTTGCACTCTTCATTGTTATCATATATGTAATGCGGCCAACCTTGTTATGGATCTTAAAGAGGTTAAATGGCAAGCCAGTTGATGAATTTTGCATCTTTTGTATTTTTCTCTTCGTTCTCCTAGCTGGAATTTTCGGTGAAGCTATTGGCCATCATTACCTTATAGGACCAATAATTTTAGGCCTAGCTGTTCCAGAAGGGCCACCTTTAGGAACAGTTTTGATAACTAAAATGGAGACAATTTCCGTGGCTTTTTTGTATCCTATCTACCTTGCTGTTGGTGGACTGGAAACTGATATCTTCAAAATCAACATGCAGTCCCTGTGGATTGTGACTGTCGTAATGTTAGTTGCTTTCGTGGCAAAGATTGGTGCTGTAATGTTGCCAGGGTATTATACCAATGTTCCCATGAAAGATTGTTTTATCATAGGACTCTTACTAAATGGAAAAGGTATAGCAGAGTTTTCCATATACCATATCTGGAAGGGAAACAAGATAATCTCCGAACGAGAGTTCACTTTGATGGTGGTCTCCATTCTAGCAGTAAATGTTATCATAACTCCACTGATAAAATTCTTATATGATCCTTCAAGGACATATTATTCTGGAAGAAGATGTTCAATTCAACATACTAAGCAAGATTCTGAGCTCAGAGTTATGGTCTGCATTTACAACAATGAAAACATCCCTTCAATCCTCAACATCTTAGAAGCATCCCATGCAAGCATAGAGAGCAAAGTTGTGGTTATAGCACTTGTCCTAGTAGAGCTTCTTGGAAGATTCAGGCCTATTCTTGTTGCTCACCAACCCCATAATACCATTCCTTTATCAACCTCATGCAATTCAAATCCCATTGTCAATGCATTGAGGCAATATGCCAAACTGAATGAAGGGTATGTATCCGTTGAGTCTTTCACTTCAATCTCTGACTTTAAAACAATACATGAAGATGTTTGTCAAATATCACTTGATGGGAGAGCCAACATTTTGATCATGCCCTTCCACAAACAATGGGAAATAGATGGTACCGTTGGGGTAACCAATAGGGCCATCCAAAATATTAACATTAAAGTCCTTGAAAGGGCACCTTGCTCAGTGGGAATTTTAATTGATAGGGGTATCTTGAGTGGTTCTCGATCACTTTCCATTGCTAGAGCAACATACTATGTTGTCGTGCTCTTCATTGGGGGTGTAGATGATGCAGAGGCACTAGCCTATGGTAATAGGATGGCTAGGAATGAGTGTGTGAACGTAACAGTGGTTCGGCTCCTTATATTTGGAGAAGAAAACTCTATAGATAGAAAACGTGACAGTGATCTTATTGATGAATATAGAAACTATAATGCTAGAAATCATCATTTTGAGATCATAGATAAAGTGGTCAAAGATGGGTTAGAGATGCCTTCATGTATAAGAAGATTGGTAGGATATTTTGATTTAGTAATAGTGGGGAGGGAGCATCCACAGTCTATTTTGTTCCAAGGACATGGCCAATGGAGTGAGTGTCCCGAGCTTGGGATCATTGGGGATATCCTAGCTTCACAGGATTTTGTGACCAAGGCATCGGTGCTGGTGGTGCAACAACAGAGAATAGGAGGGAGGCTTGTTAAACACAATCTCATTTCAGTACCAATTAAAAAAGATCCAATTGTACATGTTGTTCCAAATGAGGAAATACCATGA 2391 0.3923 MDFGVGNNTLLCQDHHSFYHKSIWNSGNPLDSPTSLLYLQVFLFTIVTQFLDVCLKPLRQSSLVSQILGGVVFGPSVLGQQKMLANTLFPLRSFTVLKTTSSFGLMFFYFICSVKMDPVSILRIEKKAITIGLSVFLSTFAFPTGMSLLLKKYVSMDKSLSDSLLPIAFSQTLTVFISISVLLTEIKALNTDIGRLTMSSALFADIICFGSAVIIFTFLENRSGNMLTLLWMILSVVALFIVIIYVMRPTLLWILKRLNGKPVDEFCIFCIFLFVLLAGIFGEAIGHHYLIGPIILGLAVPEGPPLGTVLITKMETISVAFLYPIYLAVGGLETDIFKINMQSLWIVTVVMLVAFVAKIGAVMLPGYYTNVPMKDCFIIGLLLNGKGIAEFSIYHIWKGNKIISEREFTLMVVSILAVNVIITPLIKFLYDPSRTYYSGRRCSIQHTKQDSELRVMVCIYNNENIPSILNILEASHASIESKVVVIALVLVELLGRFRPILVAHQPHNTIPLSTSCNSNPIVNALRQYAKLNEGYVSVESFTSISDFKTIHEDVCQISLDGRANILIMPFHKQWEIDGTVGVTNRAIQNINIKVLERAPCSVGILIDRGILSGSRSLSIARATYYVVVLFIGGVDDAEALAYGNRMARNECVNVTVVRLLIFGEENSIDRKRDSDLIDEYRNYNARNHHFEIIDKVVKDGLEMPSCIRRLVGYFDLVIVGREHPQSILFQGHGQWSECPELGIIGDILASQDFVTKASVLVVQQQRIGGRLVKHNLISVPIKKDPIVHVVPNEEIP* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02159 796 Pfam Sodium/hydrogen exchanger family 45 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops11g02159 796 PANTHER CATION/H + ANTIPORTER 12 766 - -
Rops11g02159 796 Gene3D - 35 435 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02159 Rops-Chr11 35811649 35814507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02159 7 764 Antiporter Super Family AT2G13620 35.924 5.95e-158 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02159 K26731 - gmx:100779700 1029.24