LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops11g02153	ATGTTGATAACGGTCAGGGAAGCTTCCTCTTCTCCCCTCTGTTCCTGGCTTAATCGTCTCATCGCAAAACCCCCTAAAACACTCAAAACTCCCATTTGCCAAGCCAGTTTCTCTGTCCAGAGAAGACCCAAAATCTCCACTGATTCATGGAACTCTTGCCATCTCTCTACCAGCAGTGAGGCAGCGAATTTTGATCCCTTGGGTATTAACACAGATTTATCTTCTACTCTAAGCTCAACCTGGAAAAATCTAGTGACTGTATTTTCACAAACATTCGAGAGTGCTTCAAGTACAGAAAAGGAAAAACCTAACTCATCTCGAGGAGTAGCAGCTGCAATAGAGGACAGTTCAATTGATTTTGGTGACTTCTTTAAAGGTCCACTGCCAGAGAAGTTTCTTAAGCTTTTAGGGTTTCTTGCATTGTCACGGCTTGGTGTGTACATACCTCTGGGTGGAGTTAATAGGGAGGCTTTTGTTGGAAATTTGGATCAGAATAGTTTATTAAGCACTCTGGACTCATTTTCTGGTGGGGGTATTGGTAGACTTGGGATATGTTCACTTGGTATTGTTCCCTTCATCAATGCACAGATTGTTTTCCAGCTTCTTGCTCAAATATATCCCAAGTTACAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAGAAAGTTCTTCAGTACACTCGATATGCCTCAGTTGGATTTGCCATTGTACAGGCAATTGGTCAAGTTCTTTACCTACGTCCCTATGTCAATGACTTTAGTACGGAGTGGGCTATTTCTTCTGTTATCTTATTGACACTAGGCTCTGTGTTTACAACCTACATTGGTGAACGAATCACTGACCTAAAACTTGGGAATGGCACATCTCTCTTGATATTCACAAACATTATCTCGTACTTGCCAGCTTCTTTTGGTCGGACATTTGCACAAGCATTTAATGATGCTAACTACGTTGGACTTGTTACCATCATACTGTCCTTCTTTCTGTTGGTAGTTGGTATTGTCTATGTTCAGGAAGCTGAGAGAAAAATTCCTCTTAACTATGCTTCTAGATTCACCAGCAGAAGCGGCGGACTTGAAAAATCTGCTTACTTACCCTTTAAGGTAAATAGTTCTGGAGTAATGCCAATCATATTTTCTACATCATCATTAGCTCTTCCTGGCACCTTAGCACGCTTCACTGGTTTAAGTGCGTTGAAGAAGGCTGCAGTGGCTTTAAACCCAGGGGGCTCCTTCTATCTTCCATTTAACATACTTTTAATAGCCTTCTTCAACTACTATTATACTTTCCTCCAATTGGACCCTGATGATATGAGTGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTCGTCCGACCAGGCAGAAGTACAGCTACATTTATCAAAACTGTTCTTAGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCTATCTTGGCTGCTGGTCCAGCAGTTATAGAGCAGACCTCACACTTGACTGCATTCCGGGGATTTGCTGGAACATCCATTCTTATCCTTGTTGGTTGTGCAACAGACACAGCAAGAAAAGTTCAAGCTGAGATTATATCCCAAAAATATAAGAACATAGAGTTCTATGACTTTGACAAGTATTGA	1620	0.413	MLITVREASSSPLCSWLNRLIAKPPKTLKTPICQASFSVQRRPKISTDSWNSCHLSTSSEAANFDPLGINTDLSSTLSSTWKNLVTVFSQTFESASSTEKEKPNSSRGVAAAIEDSSIDFGDFFKGPLPEKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWAISSVILLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTFAQAFNDANYVGLVTIILSFFLLVVGIVYVQEAERKIPLNYASRFTSRSGGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSALKKAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDMSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAGPAVIEQTSHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY*	540

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	282	305	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	256	281	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	467	485	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	373	392	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	412	434	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	132	150	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	224	247	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	182	202	-	-
	Rops11g02153	539	PRINTS	Preprotein translocase SecY subunit signature	501	519	-	-
	Rops11g02153	539	Pfam	SecY	184	515	IPR002208	GO:0015031\|GO:0016020

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops11g02153	41	539	Chloroplast and Mitochondria Gene Families	AT2G18710	82.834	0.0	843

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops11g02153	K10956		-	gmx:100810430	952.97

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