Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02123 ATGATGTTAATGCATGCCATGATGGGTTTGCTTCCATTTTCAATGGTTCTATTTTTCTATTTGACCATTGTTCATTCTGGAGTTTATGGGGAAGAAAACTTTACCATAGTGAATGAAAAAACTTCACTTCTTTCATTCATGTCAGGCATTGTTTCTGACCCGAAAAATGTTCTAGAGAGTTGGAAGTCACCAGGTGTTCATGTTTGCAATTGGTTTGGTGTAAGATGCAACAATGCAAGTGACAGGATCATAGAGCTTGATCTCAATGGAAGCTCACTGGGGGGAACCATTTCCCCTGCTCTTGCCAACCTTTCTTCATTGCAAATTCTTGATCTTTCTGAGAATTTTTTTGTGGGTCACATTCCAAAAGAACTGGGGCATTTAATTCACGTTAGACAACTCAGTTTATCTTGGAATTTTCTTGAAGGGAAAATTCCCTCTGAGTTGGGTTCACTTCATAATTTGTCCTACCTTAACATGGGTAGTAATCAGCTTCATGGTGAGATTCCACCATCACTTTTTTGCAATGAGTCTTCCACTTTGAGGTATATAGACCTCTCTAACAATTCCTTGGGGGGACAAATACCCTTGAACAATGAGTGTATCCTCAAAGAGCTTAGGTTCCTCTTACTTTGGTCTAACAAGCTTGTAGGCCAAGTTCCTTTAGCACTTTCAAACTCCACAGAACTTAAATGGCTTGATTTGGAGTCAAATATGTTGAGTGGGGAACTACCATCTGAGATTGTACCTAATTGGCCACAATTACAATTCCTCTATCTATCATATAATGACTTTGTTAGCCATGATGGTAACACCAACCTTGAACCTTTCTTTTCTTCTTTGATGAACTTATCTAACATTCAAGGACTTGAGTTGGCGGGAAACAATCTTGGAGGAAAGCTACCTCATACCATTGGTGATCTTCCTACCAGCCTGTTACAGCTTCACCTAGAAGACAATTTCATATATGGTTCTATACCTCCAAATATTGGCAACCTTGTCAACCTAACTCTCTTAAACTTTTCTAGTAACTTACTAAATGGATCAATTCCTCAGAGCCTATACCAGATGGGCAGGCTAGAGAGGATTTATTTGTCAAACAATTCACTATTTGGGGAGATTCCTTCAATCCTTGGTGGCATTCAGCATCTGGGACTTATTGACTTGTCAAGAAACAAGCTTTCTGGTTCAATACCAGACAGCTTTGCTAACCTCCCCCAATTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCAGGAACCATCCCTCCAAGTCTTGGAAAATGTATCAATTTGGAGATCTTGGACCTATCCGACAACAAGATTTCAGGGATGATCCCTAAAGAAGTTGCAGCCTTGGCTAGCTTGAAACTATACTTGAATTTATCAAGCAATAACTTACATGGGCCTCTACCATTAGAGCTCTCCAAAATGGACATGGTGCTAGCTATTGATCTATCAATGAACAATCTCTCTGGCAGAATCCCACCACAGCTTGAAAGTTGCATAGCACTGGAGTACCTCAACCTTTCTGGTAACTCCTTAGAAGGCCCTCTCCCAGATTCATTAGGTCAATTGCCTTATATTAGAGCATTTGATGTGTCTTTCAATCAATTGACCGGGTTGATACCACAGTCCCTTCAGTTGTCCCCCACTCTCAAGAAACTTAATTTTTCTTTCAATAAATTCTCAGGGAGTGTCTCAAACAAGGGAGATTTTTCATCTTTGACCATAGACTCTTTTTTAGGAAATGATGATCTCTGTGGCTCAGTAAAAGGTATGAAAAGCTGCCAAAAGAAACGAAGGTATAATTTGGTTCTCTTATTAATTCCAGTGTTACTATTTGGCACACCCTTGCTATGCATGTTTGGTTGCCCCAGAATAATTAAGTCAAAAGCCCAAAAACAATTGGCAATAGCTAGCAGAAAGGATTTGAATGATGAAGATGAGGAAACACAGGAGCTCAAGTACCCAAGAATTTCATATAGACAACTTATTGAAGCCACTGGAGGCTTCAGTGCTTCAAGCCTAATTGGTTCAGGGAGGTTTGGTCATGTCTACAAAGGAGTTCTCCAAGATAATACAAGAATAGCGGTGAAGGTATTAAATACAGCAACAGCTGGAGAGATTTCAGGGAGCTTTAGAAGGGAATGTCAAATCCTGAAAAGGACTAGGCACAGAAATTTAATAAGGATAATCACAATTTGCAGTAAACATGAGTTTAAGGCTCTAGTTCTTCCACTGATGCCTAAGGGTAGCCTTGAGAGACACTTATATCCAAGTCATGGGTTAAGCCAGAAACTTGATATGGTTCAGTTAGTGAGGATCTGCAGTGATGTTGCTGAGGGAATGGCCTATTTGCACCACTATTCTCCAGTTAGAGTAGTACACTGTGATCTTAAGCCAAGCAATATACTACTTGATGATGATTTGACAGCTTTGGTAACTGATTTTGGTATTGCAAGGCTTGTAAAAGGTGATGAGAACATGCCTGCCAGTGACTCTACATCTTTCAGCTCAACACATGGTTTGTTATGTGGCTCCATTGGCTACATAGCCCCTGAGTATGGAATGGGAAAACATGCTTCAACTCAGGGTGATGTTTACAGTTTTGGAGTTCTTCTACTAGAAATAGTGACTGGTAGACGCCCCACAGATGTCCTTGTCCATGAAGGCTCAAGCTTGCATGAATGGGTTAAGAGACAATATCCACACAAGCTTGATAACATTGTTAAACAAGCATTGCAAAGATGCTTTCCTTCTGGCATGCCAAGTCACTATCACAAAATTGGGCAAGATGTTATATTGGAACTCATAGAGTTGGGGCTTCTGTGCACAAACCAGAATCCTTCAACAAGACCAAGCATGCTGGATGTAGCCCAAGAAATGGGAAGGTTGAAGGACTACATCTCTAATCAATCTTCTTTGATTGAAGTCAATGCTATGAAGAGAAATTTGGTTGGAAAATAA 2970 0.401 MMLMHAMMGLLPFSMVLFFYLTIVHSGVYGEENFTIVNEKTSLLSFMSGIVSDPKNVLESWKSPGVHVCNWFGVRCNNASDRIIELDLNGSSLGGTISPALANLSSLQILDLSENFFVGHIPKELGHLIHVRQLSLSWNFLEGKIPSELGSLHNLSYLNMGSNQLHGEIPPSLFCNESSTLRYIDLSNNSLGGQIPLNNECILKELRFLLLWSNKLVGQVPLALSNSTELKWLDLESNMLSGELPSEIVPNWPQLQFLYLSYNDFVSHDGNTNLEPFFSSLMNLSNIQGLELAGNNLGGKLPHTIGDLPTSLLQLHLEDNFIYGSIPPNIGNLVNLTLLNFSSNLLNGSIPQSLYQMGRLERIYLSNNSLFGEIPSILGGIQHLGLIDLSRNKLSGSIPDSFANLPQLRRLLLYDNQLSGTIPPSLGKCINLEILDLSDNKISGMIPKEVAALASLKLYLNLSSNNLHGPLPLELSKMDMVLAIDLSMNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPDSLGQLPYIRAFDVSFNQLTGLIPQSLQLSPTLKKLNFSFNKFSGSVSNKGDFSSLTIDSFLGNDDLCGSVKGMKSCQKKRRYNLVLLLIPVLLFGTPLLCMFGCPRIIKSKAQKQLAIASRKDLNDEDEETQELKYPRISYRQLIEATGGFSASSLIGSGRFGHVYKGVLQDNTRIAVKVLNTATAGEISGSFRRECQILKRTRHRNLIRIITICSKHEFKALVLPLMPKGSLERHLYPSHGLSQKLDMVQLVRICSDVAEGMAYLHHYSPVRVVHCDLKPSNILLDDDLTALVTDFGIARLVKGDENMPASDSTSFSSTHGLLCGSIGYIAPEYGMGKHASTQGDVYSFGVLLLEIVTGRRPTDVLVHEGSSLHEWVKRQYPHKLDNIVKQALQRCFPSGMPSHYHKIGQDVILELIELGLLCTNQNPSTRPSMLDVAQEMGRLKDYISNQSSLIEVNAMKRNLVGK* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02123 989 CDD STKc_IRAK 678 966 - -
Rops11g02123 989 SUPERFAMILY Protein kinase-like (PK-like) 650 961 IPR011009 -
Rops11g02123 989 SUPERFAMILY L domain-like 37 268 - -
Rops11g02123 989 Gene3D Phosphorylase Kinase; domain 1 632 747 - -
Rops11g02123 989 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Rops11g02123 989 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 374 - -
Rops11g02123 989 SMART serkin_6 672 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02123 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Rops11g02123 989 Gene3D Ribonuclease Inhibitor 177 250 IPR032675 -
Rops11g02123 989 SMART LRR_typ_2 333 357 IPR003591 -
Rops11g02123 989 SMART LRR_typ_2 152 176 IPR003591 -
Rops11g02123 989 SMART LRR_typ_2 381 404 IPR003591 -
Rops11g02123 989 SMART LRR_typ_2 405 429 IPR003591 -
Rops11g02123 989 SMART LRR_typ_2 104 128 IPR003591 -
Rops11g02123 989 SMART LRR_typ_2 284 308 IPR003591 -
Rops11g02123 989 SUPERFAMILY L domain-like 279 580 - -
Rops11g02123 989 Pfam Leucine rich repeat 378 418 IPR001611 GO:0005515
Rops11g02123 989 Gene3D Transferase(Phosphotransferase) domain 1 749 984 - -
Rops11g02123 989 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 652 748 - -
Rops11g02123 989 Pfam Protein kinase domain 674 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02123 989 ProSitePatterns Protein kinases ATP-binding region signature. 678 700 IPR017441 GO:0005524
Rops11g02123 989 Gene3D Ribonuclease Inhibitor 251 604 IPR032675 -
Rops11g02123 989 ProSiteProfiles Protein kinase domain profile. 672 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02123 989 Gene3D Ribonuclease Inhibitor 35 176 IPR032675 -
Rops11g02123 989 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 36 201 - -
Rops11g02123 989 Pfam Leucine Rich Repeat 505 525 IPR001611 GO:0005515
Rops11g02123 989 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 749 975 - -
Rops11g02123 989 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 378 601 - -
Rops11g02123 989 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 363 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02123 Rops-Chr11 35138931 35142291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02123 34 968 Receptor kinase-like Gene Family AT3G47570 35.631 2.53e-163 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops11g02123 Pkinase 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02123 - - gmx:100792446 1426.38