Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02108 ATGCAGCAAGGTGATTCAACGGTTCTAAGCTTGAGACCTGGTGGTGGTCGTGGCGGCGGAAGCAGGCTTCTCGGTCACTCCTCATCATCATCTTCTCCCTCTGATCTTCCTCTCTTGCGTCCCCATGGTGCCGCTCCTTCTTCTTTCTCTCTCAAGACTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTACGATATACCAGAGATCAACTTTTACAGCTTAGAGAGGCTGTTGAGGTCCTTGACGACATTCTGAAGATTAAACAAGATATAGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCGTGCTGAAAGCGATCTTCCACATCAATCACCAAATATATATTCTGAGCCAGATAACCGTGACTGGCGTGGGCGTTCTGGACAACTTCCTCCTAATCCAGATGAGAGGTCTTGGGAAGACCTCAGAGATAAAAGGGAGTTTGGTAGTAGATTTGACTCTGGACAGCAGGATGCTAGTCAGGGAGGACATACTCCTACTCTAGTCAGGGCTGAGGTTCCATGGTCAGCTAGAAGAGGAAGTCTCTCTGAAACGGATCGTGTCTTGAGGACTGTAAAAGGAATACTAAATAAGTTGACTCCTGAGAAGTTTGATCTCTTGAAGGGTCAGTTAATTGATTCTGGCATTACATCAGCCGACATTTTGAAGGATGTCATTTCACTTATATTTGATAAGGCTGTTCTAGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGTTCTGATCTCAATGTAAAACTGCTTCCATTCCCATCTGAAAAACCTGGTGGGAAAGAAATCACTTTTAAGAGAGTACTCTTGAATATCTGTCAGGAGGCTTTTGAAGGTGCTTATAATCTGAGGGAGGAAGTAAAACAGTTGACTGCCCCTGAGCAGGAGATGGAGCGTACGGACAAGGAAAGACTGATCAAGCTTCGTACCCTTGGAAATATCCGTTTAATCGGTGAGCTTTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCCCCAGATGGCAAGTCTTGTCCAGTTGAGGAAAATGTTGAAGGCATATGTCAGTTTTTCAATACTATTGGCAAGCAACTTGATGAAAGTCCTAAATCGCGGCGAATAAATGATATGTATTTTAGCCGATTGAAAGAACTAAGCACAAACCCCCAACTTGAACTGCGGCTTAGGTTCATGATTCGGGGTGTTTTAGATTTGCGTGCTAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCTAGTATTAGAAATACCCGTGGAGGTGGTCAAGGAAATGTCATCCCTGGGGGCTTCTCCATTGCTCGACCTGGTACAGGGGGTTTGATGCCTGGATTGCCAGGGGCAAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAGGTTCCTAGGAATAGGTCTATGCCAAGAGGAGACTCGTCAGGTATTCAAGCTGCAGGACGCGGCAACGCTTCTTTACTTTCTAAGTCCACAACCCTGAATTCAAAATTGCTACCTCAAGGTAGTGGTGGTCTTATAAGTGGAAGAAGTAGTGCCCTGGTACAAGGTGGTGGTACACTTTCTAGTCGTCCATCAAACTTTGGATTAGGTAATGAGGCTGCACCTCAATTTTCTTCACCTGCTAAAACAGTTTCTGCTGTGCCCGCTGAGAAGCCACAGGCTCCAGCTGTAAGATTGAATCCTGATGATCTTCGTCGCAAAACCATCTCTCTTCTGGAAGAATATTTCAGTGTTCGGATTTTGGAAGAGGCATTGCAGTGTGTGGAGGAATTAAAATCTCCATCTTACCACCCTGAGGTTGTTAAGGAAGCCATTTCCCTTGCACTTGATAAAAGTCCACCTTGTGTTGAACCGGTTGCCAATCTTCTTGAGTATCTGTTTATCAAGAAGATTCTTACAGCTAACGACATAGGAACTGGGTGTTTGTTATTTGGTTCTCTTCTGGATGACATTGGCATAGATTTACCTAAAGCACCAAGTAATTTTGGTGAGATAATTGGGAAACTAATTTTGGCTGAGGGGTTGGATTTTAAGGTGGTTGGAGAGATTCTCAAGAAGGTGGATGATGACATGTTCCAGAGAGTGATATTTGAGAGTGCTGTTCGGGTCACTAAATCTGCATCCGGGCAAGCTGTGTTGGAATCACAAGCATCAGATATTGAGGCCTGCCAGAGTCTGCTCAAGTGA 2301 0.4494 MQQGDSTVLSLRPGGGRGGGSRLLGHSSSSSSPSDLPLLRPHGAAPSSFSLKTGDSRFEGRERVRYTRDQLLQLREAVEVLDDILKIKQDIEAELFGEDQSWGRAESDLPHQSPNIYSEPDNRDWRGRSGQLPPNPDERSWEDLRDKREFGSRFDSGQQDASQGGHTPTLVRAEVPWSARRGSLSETDRVLRTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNVKLLPFPSEKPGGKEITFKRVLLNICQEAFEGAYNLREEVKQLTAPEQEMERTDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDGKSCPVEENVEGICQFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLELRLRFMIRGVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNTRGGGQGNVIPGGFSIARPGTGGLMPGLPGARKMPGMPGIDNDNWEVPRNRSMPRGDSSGIQAAGRGNASLLSKSTTLNSKLLPQGSGGLISGRSSALVQGGGTLSSRPSNFGLGNEAAPQFSSPAKTVSAVPAEKPQAPAVRLNPDDLRRKTISLLEEYFSVRILEEALQCVEELKSPSYHPEVVKEAISLALDKSPPCVEPVANLLEYLFIKKILTANDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAEGLDFKVVGEILKKVDDDMFQRVIFESAVRVTKSASGQAVLESQASDIEACQSLLK* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02108 766 FunFam Eukaryotic translation initiation factor isoform 4G-2 182 418 - -
Rops11g02108 766 MobiDBLite consensus disorder prediction 102 141 - -
Rops11g02108 766 SUPERFAMILY ARM repeat 597 742 IPR016024 -
Rops11g02108 766 MobiDBLite consensus disorder prediction 1 54 - -
Rops11g02108 766 FunFam Eukaryotic translation initiation factor isoform 4G-2 595 756 - -
Rops11g02108 766 SMART if4_15 191 417 IPR003890 GO:0003723|GO:0005515
Rops11g02108 766 Gene3D - 595 761 - -
Rops11g02108 766 Gene3D - 182 418 - -
Rops11g02108 766 SMART ma3_7 602 714 IPR003891 -
Rops11g02108 766 SUPERFAMILY ARM repeat 185 420 IPR016024 -
Rops11g02108 766 Pfam MA3 domain 602 714 IPR003891 -
Rops11g02108 766 Pfam MIF4G domain 191 417 IPR003890 GO:0003723|GO:0005515
Rops11g02108 766 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 50 761 IPR045208 GO:0003743
Rops11g02108 766 ProSiteProfiles MI domain profile. 601 723 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02108 Rops-Chr11 34752030 34758399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02108 1 764 Eukaryotic Initiation Factors Gene Family AT5G57870 63.151 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02108 K03260 - gmx:100816500 1162.9