Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02105 ATGCTTGTAAGTCTCGTTAGACTCCGCTTTCACGACTGTTTCGTTCAAGGCTGTGATGCATCGATTTTGCTGAACGACACCGCTACTATCGTGAGTGAGCAAGGAGCTTTTCCAAATAACAACTCGATAGGAGGTTTGGATGTGGTGAACCAGATTAAGACAGTTGTGGAAGATGCTTGTCATAACACAGTTTCTTGTGCTGGCATTCTTGCACTTGCTGCTGAGATATCTTCTGTTCTGGCTCATGGTCCTGCCTGGAAAGTTCCATTGGGAAGAAGGGGTAGTTTAACAGCAAACCGAACTCTTGCTAATCAAAATCTCCCACATCAAATGCTCTTTGCAAGATGTGTTGACCAGCTGCAGTTGTTATTGGCAAATGCTCAGAAGGGAGAAGGCTCGCGTCCTTTGGCTAACGGCCTTGAGCCAAATGATCTTGGTTCTTACTTCATGAAGTTCTTCGGTACCTTACGCAACACTCCTTCAGTTTCCCTCTTCCGGTCTTTAGATGATGAGGATGAAAAAGTAGTAAAAAAAATCTGCAAGCAATAG 549 0.4444 MLVSLVRLRFHDCFVQGCDASILLNDTATIVSEQGAFPNNNSIGGLDVVNQIKTVVEDACHNTVSCAGILALAAEISSVLAHGPAWKVPLGRRGSLTANRTLANQNLPHQMLFARCVDQLQLLLANAQKGEGSRPLANGLEPNDLGSYFMKFFGTLRNTPSVSLFRSLDDEDEKVVKKICKQ* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02105 182 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 SUPERFAMILY Heme-dependent peroxidases 3 111 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 PANTHER PEROXIDASE 72-RELATED 1 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 ProSiteProfiles Plant heme peroxidase family profile. 1 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 Pfam Peroxidase 3 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02105 182 Gene3D - 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02105 Rops-Chr11 34660410 34660958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02105 1 108 Peroxidase AT1G44970 61.111 3.02e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02105 K00430 - gmx:112997600 184.496