Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02102 ATGATGGCATTCCAAACCAACAAGGTCCATTTCTTCTTCTTCCTGTTCTCATTAATCTTTTCATTTTCATGCATTCTTGCTGTGCCAAAGGAGCAAGAGCTAGATCGAATCTTGGCTCTCCCGGGGCAACCACCAGTGACATTTTCTCAGTTCTCTGGTTATGTCACTGTCAATGAGGAACATGGCAGAGCACTCTTCTACTGGTTCACTGAGGCCACCACTTCCCCTGAGAATAAACCTCTTGTTCTCTGGCTCAATGGAGGGCCAGGTTGCTCATCAGTGGCATATGGGGCATCAGAGGAAATTGGGCCATTCCGTATAAACAAAACTGGCTCTTCTCTGTACCTTAACAAACATGCATGGAATAAAGATGCAAATATCCTCTTTCTTGAATCACCAGCTGGTGTTGGTTTCTCATACACAAATACCAGTTCTGACCTCAAAACTACTGGGGACAAAAGGACAGCTCAGGATGCTTTGATTTTTCTAGTTAGATGGATGGATAGATTTCCACAATATAAATATAGGGAGTTTTACATTGCTGGGGAGAGCTATGCAGGGCATTATGTCCCCCAGTTGGCTAAGAAAATCCATGATTATAATAAAGAAAATCCTCATATTATTAATCTTAAAGGGTTCATGGTGGGAAATGCTGTGACTGATGATTACTATGATGGGATTGGAACAATTATGTATTGGTGGAGCCACTCTATGATATCTGATCAATCATACAAATCTATCCTTAAATACTGTAATTTCACTGCAAGAAAAATAAATAAAAAATGTGACCATGCAGTGAGTTATGCGATTAACCATGAATTTGGGAACATTGATCAATACAGTATCTATACCCCTGCATGTATAACATCACAAAATGAGACTGTAAGGCACGTTAGGCCCAAGAGCTCAATTTTACATAGGATTTCTGGGTATGATCCGTGTACTGAAAATTATGCAGAGAAATATTATAATCGCCCTGATGTGCAGAAAGCAATGCATGCAAATGTTACAAACATTCCTTATAAATGGACTGCTTGCAGTGATGAGCTTAATAAACATTGGAGGGATTCTGAAGTTTCTATATTGCCCATATACAAAGAGTTAATTGCAGCGGGTTTGAGAATCTGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTAACTGCCACAAGGTTTTCTCTCAACCATCTCAACCTCACCATCAAAACTCGTTGGTATCCATGGTACTCAGGTGAACAGGTTGGTGGATGGACAGAGATATATAATGGACTAACTTTTGCAACAGTGAGAGGAGCTGGGCATGAAGTACCATTGTTTCAGCCAGAGAGAGCTTACATACTTTTCAGGTCGTTTTTGGCAGGGAAAGAGTTACCAAAATCTTGA 1386 0.4062 MMAFQTNKVHFFFFLFSLIFSFSCILAVPKEQELDRILALPGQPPVTFSQFSGYVTVNEEHGRALFYWFTEATTSPENKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNKHAWNKDANILFLESPAGVGFSYTNTSSDLKTTGDKRTAQDALIFLVRWMDRFPQYKYREFYIAGESYAGHYVPQLAKKIHDYNKENPHIINLKGFMVGNAVTDDYYDGIGTIMYWWSHSMISDQSYKSILKYCNFTARKINKKCDHAVSYAINHEFGNIDQYSIYTPACITSQNETVRHVRPKSSILHRISGYDPCTENYAEKYYNRPDVQKAMHANVTNIPYKWTACSDELNKHWRDSEVSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTRWYPWYSGEQVGGWTEIYNGLTFATVRGAGHEVPLFQPERAYILFRSFLAGKELPKS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02102 461 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Rops11g02102 461 Gene3D - 314 351 - -
Rops11g02102 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 442 IPR001563 GO:0004185|GO:0006508
Rops11g02102 461 Gene3D - 361 455 - -
Rops11g02102 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Rops11g02102 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Rops11g02102 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Rops11g02102 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Rops11g02102 461 FunFam Carboxypeptidase 31 289 - -
Rops11g02102 461 Pfam Serine carboxypeptidase 42 454 IPR001563 GO:0004185|GO:0006508
Rops11g02102 461 SUPERFAMILY alpha/beta-Hydrolases 35 458 IPR029058 -
Rops11g02102 461 ProSitePatterns Serine carboxypeptidases, histidine active site. 425 442 IPR033124 GO:0004185
Rops11g02102 461 Gene3D alpha/beta hydrolase 31 289 IPR029058 -
Rops11g02102 461 FunFam Carboxypeptidase 361 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02102 Rops-Chr11 34605598 34613169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02102 319 458 Calmodulin-binding Proteins AT2G22960 31.915 1.76e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02102 K16297 - gmx:100785391 806.208