Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02091 ATGGCCAACCACAACAGTGGCAGCACCACCTCCCAAGCTGAACGAAACCATAAGCAAGGAAATGATAAAACTCAAGAGCAAGAAAAAGAGATGCGTCAACGAGTCACTGACTCAGCACCCTCCACTGAGTCACGTATCTCAGTGCAACCTGATTCAGAAACCCTAGTTGTCCCCTCTTCGGTTTCGCACGATGATAACACTGCTCATTTGCAGGGAAGCTCCAACACGCATGGTAAAGACGAAAGTAAGGAGCCAGCTGGGCCTCCTGACAAGGAATTTACTGTAAAAGATGCAGTTGAGCCACCTCAAATGCAAACAGAAAATCAACTTCAGGTGTCTGTTTGTTCAACACCATTGTCTGAACTATCACCAACTTCTGTTACACAATCTTTATCATCTGCCCCTAGTCCAACTGTACCAGAACAGAGACTGTCTCCTCCAAAGGCTATCAGTGCACATGCACTAGATGTAGACAAAAAAACTCCTTCGAGGGGTAAAACCTTATCTACTGTTTCTGTTGCAAGGGCATCTGCATCTGATGGATACAACTGGCGTAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGCTCTCGAAGCTATTACAGGTGTACTCATTCAGATTGTTGTGCTAAGAAAATTGAATGCTGTGATCATTCTGGTCATGTGATTGAGATCATTTATAAAAGTCAACACAGTCATGATCCCCCCCATAAAACTAATGCCACTAGGGAAAGTAAATTCCTGCCTTCCAATGAACCTAATGTAGAAAACACCATTCCAAAGCAGTCTATTGGAGTTCTAAATGATTCTAATTCATCACCTTCTCCAAAAAATCCTCTACAAGAAGCACCTTGCAGTGCTGATAAGAAACGACAAAACTCATCTAACAGTGAGAATGGTAAAGTCATTTTGAAGGAAGAACATGTAAATGAGCCAGAGCCAAAAAGAAGAATGAAGAAAGGGGATTTAACATGCTCGGATTCACCAGTAAAACCTGGAAAGAAACAAAAGTTTGTTGTACATGCGGCCGGAGACGTGGGAATATCAGGTGACGGATACCGATGGCGTAAGTATGGACAAAAAATGGTGAAGGGGAATCCACATCCCAGAAACTACTATAGATGCACCTCTGCTGGATGTCCTGTCCGGAAGCACATAGAGACTGCTGTGGATGACTCAAACACCGTCATCATAACATACAAGGGAGTACATGACCATGACATGCCTGTGCCAAAGAAACGACATGGCCAGCCGAATGCTCCCCTCGTGGCTGCTGCAGCACCTGCTTCAATGAACAATTTGCAGTTCAAGAAAACTGACTCACTGCAAAACCAGAAAACTTCTACTCAATGGTCAGTGGACACAGAAGGAGAATTAACCGGGGAAGCCTTGGACCTTGGTGGTGAGAAAGCAATAGAATCAGCTCGAACCCTTCTGAGTATAGGTTTTGAAATTAAACCTTGCTGA 1470 0.4401 MANHNSGSTTSQAERNHKQGNDKTQEQEKEMRQRVTDSAPSTESRISVQPDSETLVVPSSVSHDDNTAHLQGSSNTHGKDESKEPAGPPDKEFTVKDAVEPPQMQTENQLQVSVCSTPLSELSPTSVTQSLSSAPSPTVPEQRLSPPKAISAHALDVDKKTPSRGKTLSTVSVARASASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVIEIIYKSQHSHDPPHKTNATRESKFLPSNEPNVENTIPKQSIGVLNDSNSSPSPKNPLQEAPCSADKKRQNSSNSENGKVILKEEHVNEPEPKRRMKKGDLTCSDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDDSNTVIITYKGVHDHDMPVPKKRHGQPNAPLVAAAAPASMNNLQFKKTDSLQNQKTSTQWSVDTEGELTGEALDLGGEKAIESARTLLSIGFEIKPC* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02091 489 MobiDBLite consensus disorder prediction 1 15 - -
Rops11g02091 489 ProSiteProfiles WRKY domain profile. 173 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 MobiDBLite consensus disorder prediction 244 281 - -
Rops11g02091 489 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 119 449 IPR044810 GO:0003700
Rops11g02091 489 MobiDBLite consensus disorder prediction 1 145 - -
Rops11g02091 489 MobiDBLite consensus disorder prediction 302 325 - -
Rops11g02091 489 SMART WRKY_cls 350 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 SMART WRKY_cls 178 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 MobiDBLite consensus disorder prediction 16 36 - -
Rops11g02091 489 Gene3D WRKY domain 165 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 Gene3D WRKY domain 335 411 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 MobiDBLite consensus disorder prediction 37 75 - -
Rops11g02091 489 MobiDBLite consensus disorder prediction 101 139 - -
Rops11g02091 489 SUPERFAMILY WRKY DNA-binding domain 346 410 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 Pfam WRKY DNA -binding domain 352 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 Pfam WRKY DNA -binding domain 180 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 MobiDBLite consensus disorder prediction 231 333 - -
Rops11g02091 489 FunFam WRKY transcription factor 335 411 - -
Rops11g02091 489 MobiDBLite consensus disorder prediction 76 97 - -
Rops11g02091 489 ProSiteProfiles WRKY domain profile. 345 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02091 489 SUPERFAMILY WRKY DNA-binding domain 176 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02091 Rops-Chr11 34424598 34432749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02091 113 489 WRKY Transcription Factor Family AT4G30935 55.759 1.74e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops11g02091 WRKY 7.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02091 - - gmx:100127377 667.151