Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02085 ATGGGTGATAAAACCATTAGCAGAAGCAGTGACCTGAACTCCACTTTGCTCCATGGAAAGTACGAGCTAGGTCGCCTTCTTGGCCATGGAACATTCGCGAAGGTCTACCATGCGAGGAACCTGCAAACAGGAAAAAGCGTGGCCATGAAGGTGGTTGGAAAGGAAAAAGTAATCAAAGTTGGCATGATGGAGCAGATGAAGAGAGAGATCTCAGCCATGAGCATGGTGAAACACCCTAACATCGTTCAACTGAATGAAGTCATGGCAAGCAAAACCAAGATCTACATCGCCATGGAACTCGTCCGTGGTGGAGAACTCTTCAACAAGATCGCAAGGGGTAGATTGAGAGAAGACGCCGCCAGGCTTTACTTTCAGCAATTAATCTCTGCCGTTGATTTCTGCCACAGCCGCGGTGTTTACCACCGTGATCTCAAACCGGAGAACCTCCTTTTAGATGATGAAGGGAACCTTAAAGTCACCGACTTTGGACTCAGCACTTTTGCCGAACATCTCAGAACAGATGGGTTGCTTCACACCACGTGCGGCACTCCTGCTTACGTGGCACCTGAAGTGATTGGGAAGAAGGGTTACGATGGTGCCAAGGCTGATATTTGGTCATGTGGTGTTATTCTTTACGTGCTTCTCGCTGGGTTTTTACCCTTTCAAGATGAGAATTTGGTGGCTATGTATAAGAAGATCTACAGGGGAGACTTCAAATGTCCACCCTGGTTTTCCTCTGAAGCAAGAAGACTCATCACGAAGCTTCTAGATCCGAATCCGAATACAAGAATCACAATTTCCAAGATCATGGAGTCTTCCTGGTTCAAGAAATCAGTTCCCAGGAACGTGATAGGATCGAGGAAAGATGAGGATTTGGAGGAGAAATTGAAGCAACAACAACCTTCAACTATGAATGCTTTTCATATAATTTCACTTTCTGAAGGGTTTGATTTGTCGCCGTTGTTTGAGGAGAAGAAAAGGGAAGAGAAAGAGGAGATGAGGTTTGCGACAACGAGGCCAGCGAGTAGCGTGATTTCGAGGTTGGAGGAGGTTGCAAAAGCAGGAAAATTTGATGTGAAGAAGAGTGATACAAAGGTGAGGTTACAGGGTCAGGAACGTGGGCGAAAAGGGAAGCTGGCTATTGCTGCTGATTTATATGCTATTACGCCGTCGTTTTTAGTGGTTGAGGTGAAGAAAGATAACGGTGATACCTTGGAGTACAACCAGTTCTGCAGCAAAGAGCTTCGTCCTGCGCTTAAAGACATAGTGTGGAGGACCTCACCTGCTGAGAATCCCACACCTGCTTGA 1308 0.4641 MGDKTISRSSDLNSTLLHGKYELGRLLGHGTFAKVYHARNLQTGKSVAMKVVGKEKVIKVGMMEQMKREISAMSMVKHPNIVQLNEVMASKTKIYIAMELVRGGELFNKIARGRLREDAARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDDEGNLKVTDFGLSTFAEHLRTDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDENLVAMYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNTRITISKIMESSWFKKSVPRNVIGSRKDEDLEEKLKQQQPSTMNAFHIISLSEGFDLSPLFEEKKREEKEEMRFATTRPASSVISRLEEVAKAGKFDVKKSDTKVRLQGQERGRKGKLAIAADLYAITPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWRTSPAENPTPA* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02085 435 CDD STKc_SnRK3 20 274 - -
Rops11g02085 435 Gene3D Kinase associated domain 1, KA1 298 425 - -
Rops11g02085 435 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Rops11g02085 435 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
Rops11g02085 435 FunFam Non-specific serine/threonine protein kinase 11 304 - -
Rops11g02085 435 ProSiteProfiles NAF domain profile. 299 323 IPR018451 GO:0007165
Rops11g02085 435 SUPERFAMILY Protein kinase-like (PK-like) 18 276 IPR011009 -
Rops11g02085 435 CDD CIPK_C 305 420 - -
Rops11g02085 435 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02085 435 Gene3D Transferase(Phosphotransferase) domain 1 103 281 - -
Rops11g02085 435 FunFam Non-specific serine/threonine protein kinase 299 424 - -
Rops11g02085 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 421 - -
Rops11g02085 435 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02085 435 Pfam NAF domain 301 361 IPR004041 GO:0007165
Rops11g02085 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Rops11g02085 435 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02085 435 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02085 Rops-Chr11 34275068 34276988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02085 1 429 CBL-interacting serine-threonine protein kinases AT4G30960 74.091 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops11g02085 Pkinase 6.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02085 - K07198 gmx:100806762 766.918