Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02064 ATGACAGTGGAGAACCAAAGGGGTCGTTTTGTGGATGAAGATGGGGCCAGTGACCGTTTTCCTATGGGTATGCGTGTTCTTGCTGTGGATGATGACCCAATTTGTCTCAAAGTGTTGGAGAATCTCCTTCGCAAATGCCAGTATCAGGTTACTACAACTAGTCAGGCAGTTGAGGCGCTGAGGATGTTAAGGGAAAACAGAAATAAGTTTGACCTTGTTATCAGTGATGTAAATATGCCGGACATGGATGGATTTAAGCTCCTTGAGTTGGTGGGACTTGAGATGGACTTACCTGTCATCATGTTGTCGGCACACAGTGATACAAAGCTGGTGATGAAGGGTGTTACACATGGTGCTGTTGACTATTTGCTGAAACCTGTTCGAATTGAAGAGCTCAAGAACATATGGCAACATGTTCTCCGAAGAAAAAGTATTGATTCCAAGGATCAGAATAGGGCTTCCAATGAGGAAAGGGCTCCTAATATTTCTGGGGGAGGCAGTCAAGGTATCATATCAGAAAACAGTGCTGACCAAAATAAAAGGCTTGGTAAAAAAAGGAAGGACCAAAGTGAGGAGGAAGAAGAAGATGACGAAGGGAATGGTGATGAGGAGGATCCCTCGGCGCAGAAGAAACCTCGTGTAGTTTGGTCTGTCGAGCTGCATAGAAAATTTGTTGCTGCAGTAAATCAACTGGGCCTAGATAAGGCGGTTCCTAAGAAAATACTTGACCTGATGAATGTTGAAGGGCTTACTAGGGAAAATGTGGCCAGCCATTTGCAGAAATATAGACTTTATCTGAAAAAGGCAACCCAGCAAGCTAGCATGGTTGCTGCATTGGGTAGTAGTGATTCTTACCTACGGATGAGTGCACTAGATGGATATGGAGAATTTTGTACCTCGTCTGGATCTGGAAGGATCTCCAGCACCACTTTACCATCATATGCATCAAGTGGAATTTTTGGTAGGCTGAATTCCCCAGCTGGCTTGAGCTTGAGAGGAATTAGTTCTACTGCACTAATGCGGCCTGGTCAGTCTCAAAACATTAACAACTCCTTAAACACACTTGGAAACATTCAGCCATCCATGTTTCCTGCAAATCAGAGCTCAAGTTTATTACAAGGCATTCCAACAACAATTGAGCTTAACCAGTCTAAGCAAAACAACTGCACAAGTGGTATGTCGCAATTAAGTCCAATTGATTCAAGTGGATTTGCAGTTGCCTCTGGTTTCCCAGACAGTAGGGCTACAGTTAGTAATGCAAACAATTCTCTACCTGGTGTCTCAACTAATCATTTAATGTTAGGAAATTCACAGCAAACACATAATACAGGAGTATTTAGAAATCAATCTTCTGTTAGAGCTGCTCCTATAAGCACAGAATCTTTTGACATGGGCATTTCTGGTTCGTCAAATTTGTTGGATTATAATCGGTGTAATGAAAACTGGCATAACGCTGCAGAGTTGTCTAAATTTTCTGCCAATTCTTTGCCATTGGGTGAGGCTTTCAATAATGACCAACTGACTCCCACTAGCTTAAACGTTTCCAACTCAAGTACTCAGATTGGCAACAGTCCAGTGGATTTTTCTTCCGGAATTGCGATTTCTGTTCCTTTGGACGACACCCGAAATGAGCTGCGATGCCAAGAAGGCTTAATTGGTAATATTATCCAGCCTTCAAGTTACACGCCACGACAAAGGTGGGAAGAACATAAACTGGATTACAACCAAAACATGAGTCGTCCCTTCAATCCTGTAAATTCACAGCTTTCTTCCTGTGGAATGACAAGTTCTTTGGGGCCTAGTTTAAACCAAAATAAAACAATTTGCAGCAATAGAGTTGATGCATCTTTGGTTGGCCAATTAAATGGGGCTTCCCCCTCAATTGCCCGGTGCACTGAAATTGAGAAATTCTCTTCAGACATACGACTGAAGTCGAATGATGCCTACATTTTGGAGCAAATGAAGTCCCAAGATGGATATATTCAGAATTTTGGGACCTTGGATGACATGATGGGTGCAATGGTCAAAAGGGAGCAAAATGAGTTGACATTGATGGATGGAGAGATGGGATTTGATGCCTATCCTGTTGGATCATGTATCTGA 2103 0.4256 MTVENQRGRFVDEDGASDRFPMGMRVLAVDDDPICLKVLENLLRKCQYQVTTTSQAVEALRMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTKLVMKGVTHGAVDYLLKPVRIEELKNIWQHVLRRKSIDSKDQNRASNEERAPNISGGGSQGIISENSADQNKRLGKKRKDQSEEEEEDDEGNGDEEDPSAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKKATQQASMVAALGSSDSYLRMSALDGYGEFCTSSGSGRISSTTLPSYASSGIFGRLNSPAGLSLRGISSTALMRPGQSQNINNSLNTLGNIQPSMFPANQSSSLLQGIPTTIELNQSKQNNCTSGMSQLSPIDSSGFAVASGFPDSRATVSNANNSLPGVSTNHLMLGNSQQTHNTGVFRNQSSVRAAPISTESFDMGISGSSNLLDYNRCNENWHNAAELSKFSANSLPLGEAFNNDQLTPTSLNVSNSSTQIGNSPVDFSSGIAISVPLDDTRNELRCQEGLIGNIIQPSSYTPRQRWEEHKLDYNQNMSRPFNPVNSQLSSCGMTSSLGPSLNQNKTICSNRVDASLVGQLNGASPSIARCTEIEKFSSDIRLKSNDAYILEQMKSQDGYIQNFGTLDDMMGAMVKREQNELTLMDGEMGFDAYPVGSCI* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02064 700 SUPERFAMILY CheY-like 23 148 IPR011006 -
Rops11g02064 700 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Rops11g02064 700 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Rops11g02064 700 FunFam Two-component response regulator 207 270 - -
Rops11g02064 700 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Rops11g02064 700 Gene3D - 207 269 - -
Rops11g02064 700 CDD REC_typeB_ARR-like 26 140 - -
Rops11g02064 700 SUPERFAMILY Homeodomain-like 209 268 IPR009057 -
Rops11g02064 700 MobiDBLite consensus disorder prediction 156 177 - -
Rops11g02064 700 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 382 IPR045279 GO:0009736
Rops11g02064 700 NCBIfam myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Rops11g02064 700 MobiDBLite consensus disorder prediction 146 211 - -
Rops11g02064 700 Gene3D - 23 160 - -
Rops11g02064 700 SMART REC_2 24 136 IPR001789 GO:0000160
Rops11g02064 700 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02064 Rops-Chr11 33654608 33660249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02064 16 424 Response Regulator Gene Family AT2G25180 53.494 1.70e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Rops11g02064 Response_reg 2.3e-26 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02064 K14491 - gmx:100776075 1118.99