Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02049 ATGGAGATTTTCAAATGCTTGTACTTCAATCTTCTCTTTACTCTCATGTTATCAGCAGTTTTAGTAGCAATTGACCCTTATTCAGAGGCACTCCTGAGCCTAAAATCTGAACTTGTAGATGATGATAACAGCTTGCATGACTGGGGGGTGGTTCCCTCTGGAGGGAACGTAACTGGGAAATCCTATGCATGTTCTTGGTCAGGAATCAAGTGTGATAAGGAGTCAACAATTGTAACATCCATAGACCTTTCCGTGAAGAAACTTGGGGGTGTAATATCAGGAAAGCAATTTAGTGTCTTCACAAAGCTTGTTGATCTCAACCTGAGCCACAATTTCTTCTCTGGGCAGCTTCCAGCTGAAATTTTCAACCTCACCAGCCTAAAAAGCTTGGATATAAGCAGAAACAATTTTTCTGGTCACTTCCCTGGGGGAATTCCCAGACTCCAGAATTTGGTTGTGCTTGATGCCTTTAGCAACAGCTTTTCAGGGCCATTGCCTGCTGAATTTTCACACCTGGAATATCTTAAGGTTCTTAATCTAGCTGGGAGTTACTTCAAAGGACCAATTCCATCTGAATATGGTTCTTTCAAAAGCCTTGAGTTTCTTCATCTTGCAGGAAATTCTCTCACAGGAAGTCTACCTCCAGAACTGGGTAACCTCAAAACAGTGACCCACATGGAGATTGGCTACAACTTCTACCAGGGTTTCATTCCATCCCAACTAGGTAATATGAGCCAGCTTCAGTATCTTGACATAGCAGGTGCAAATCTTTCAGGTCCAATACCAAAGGAACTGTCCAATCTCACCAATTTGCAATCGCTTTTTCTGTTCAGAAACCAGCTCATAGGATCAATACCAAGTGAGTTCAGCAAAATCAAAACTCTCACAGATTTAGATCTCTCTGATAACTTCCTTTCAGGGTCTATTCCTGAAAGCTTTTCAGAGTTGAAGAACCTAAGACTACTCAGTCTCATGTACAATGACATGAGTGGCACTGTTCCAGGAGGCGTTGCACAACTCCCTTCCTTGGAAACTCTTCTCATTTGGAACAATCGCTTCTCTGGATCACTTCCACAGAGCTTAGGCAGAAACTCCAAACTCAAGTGGGTTGATGTCTCCACAAACAACTTCATTGGTAGCATACCACCTTACATTTGTGTGAGTGGAGTGCTATTTAAGCTAATGCTGTTTTCAAACAAATTCAGAGGTGGTCTTTCATCAATCTCCAACTGTTCTTCCCTTGTTCGTCTTCGCCTAGAAGATAATTCATTCTCAGGAGAGATCTCTTTGAAATTCAGCCATCTTCCTGATATCTCATATGTTGATCTGTCCAGGAACAATTTTGTTGGTGGGATTCCCTCAGATATATCTCAAGCTACTCAACTGGAGTACTTCAATGTCTCTTATAATCCACAATTAGGAGGCACCATTCCACCACAAATTTGGTCTTTGCCCCTACTTCAAAACTTTTCAGCATCTTCTTGTGGTATTTTAGGTGATCTTCCCCCATTTGAGTCCTGCAAATCAATTTCAGTTATTGATCTTGATAGCAACAACTTATCTGGAAAAATCCCAAACAGTGTTTCCAAATGTCAAGCTCTTGAGGAAATTAAATTATCTAACAATAATCTGACAGGTCAAATACCTGAGGAGCTTGCTAGTATCTCTGTTCTTGAAGTAGTAGACCTACCTAACAACAAGTTCAATGGCCACATACCTGCAAAGTTTGGTACTTCTTCAAGTTTACAACTTCTCAATGTGTCTTTCAACAATATCTCAGGTTCCATACCCACAGGAAAGTCATTCAAATTAATGGGTAGCAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGCACCTCTGCGACCATGTCCTGATTCAGTTGGAATATTGGGTAGCAAAGGGACGTGGAAGCTTACACGTATTTTGCTACTCTCTGTAGGGTTGCTAATAATCCTTCTAGGATTGGCTTTTGGAATACTTTATTTCAGAAGGGGAGTTAAAAGTCAATGGAAGATGGTTTCATTTGCTGGACTCCCTCAATTCACAGCAAATGATGTTTTGACAAGCTTCAGTGCCACAAAACCAACACAAGTTCCATCACCATCACCTGTAGTTACAAAGGCAGTTTTGCCAACAGGTATAACAGTTTTGGTCAAGAAGGTTGAGTGGGAAGCAAGAAGCATTAAGGTGGTGTCAGAATTTATAATGAGACTTGGAAATGCAAGGCACAAGAATTTGATCAGACTATTGGGTTTTTGCCATAACCAGCACACAGTCTATCTTTTGTATGATTACTTGCCTAATGGGAATTTGGCTGAAAAAATTGGAACGAAATGGGATTGGGGAGCTAAATTCAGAACAGTGGTTGGGATTGCAAGGGGACTTTGCTTCCTTCACCATGATTGTTACCCAGCTATACCCCATGGAGACTTGAAGTCCAGCAACGTTGTGTTTGATGAAAACATGGAACCCCATTTGGCAGAATTTGGGTTCAAACATGTGTTAAAGTTGAGCAATGGCTCATCTCCAACCACAACCAACAGGGAAACAGAATACAATGAAGCAATAAAAGAGGAAATCTGCATGGATGTCTACAAATTTGGGGAGATGATTTTGGAAATTTTAACTGGTGGAAGTTTGACAAGTGCAAGCATTCACAGCAAATCAAGGGAGGTTCTTTTAAGAGAAATTTACAATGAGAATGAAGTGAGTTCTGCCACTTCATTGCAAGAGATTAAACTGGTTCTTGAGGTTGCTATGCTTTGCACTAGAAGCAGCTCATCCGATAGGCCATCCATGGAAGATGCTCTTAAGCTTTTGTCAGGGTTAAAGCATCTAGAAGATGGCAGAACTTCAAAAGAAGGGAAATAA 2874 0.4095 MEIFKCLYFNLLFTLMLSAVLVAIDPYSEALLSLKSELVDDDNSLHDWGVVPSGGNVTGKSYACSWSGIKCDKESTIVTSIDLSVKKLGGVISGKQFSVFTKLVDLNLSHNFFSGQLPAEIFNLTSLKSLDISRNNFSGHFPGGIPRLQNLVVLDAFSNSFSGPLPAEFSHLEYLKVLNLAGSYFKGPIPSEYGSFKSLEFLHLAGNSLTGSLPPELGNLKTVTHMEIGYNFYQGFIPSQLGNMSQLQYLDIAGANLSGPIPKELSNLTNLQSLFLFRNQLIGSIPSEFSKIKTLTDLDLSDNFLSGSIPESFSELKNLRLLSLMYNDMSGTVPGGVAQLPSLETLLIWNNRFSGSLPQSLGRNSKLKWVDVSTNNFIGSIPPYICVSGVLFKLMLFSNKFRGGLSSISNCSSLVRLRLEDNSFSGEISLKFSHLPDISYVDLSRNNFVGGIPSDISQATQLEYFNVSYNPQLGGTIPPQIWSLPLLQNFSASSCGILGDLPPFESCKSISVIDLDSNNLSGKIPNSVSKCQALEEIKLSNNNLTGQIPEELASISVLEVVDLPNNKFNGHIPAKFGTSSSLQLLNVSFNNISGSIPTGKSFKLMGSSAFVGNSELCGAPLRPCPDSVGILGSKGTWKLTRILLLSVGLLIILLGLAFGILYFRRGVKSQWKMVSFAGLPQFTANDVLTSFSATKPTQVPSPSPVVTKAVLPTGITVLVKKVEWEARSIKVVSEFIMRLGNARHKNLIRLLGFCHNQHTVYLLYDYLPNGNLAEKIGTKWDWGAKFRTVVGIARGLCFLHHDCYPAIPHGDLKSSNVVFDENMEPHLAEFGFKHVLKLSNGSSPTTTNRETEYNEAIKEEICMDVYKFGEMILEILTGGSLTSASIHSKSREVLLREIYNENEVSSATSLQEIKLVLEVAMLCTRSSSSDRPSMEDALKLLSGLKHLEDGRTSKEGK* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02049 957 Pfam Protein tyrosine and serine/threonine kinase 714 939 IPR001245 GO:0004672|GO:0006468
Rops11g02049 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Rops11g02049 957 Gene3D Phosphorylase Kinase; domain 1 701 764 - -
Rops11g02049 957 Gene3D Transferase(Phosphotransferase) domain 1 765 955 - -
Rops11g02049 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 190 294 - -
Rops11g02049 957 Gene3D Ribonuclease Inhibitor 388 628 IPR032675 -
Rops11g02049 957 SUPERFAMILY RNI-like 309 598 - -
Rops11g02049 957 Gene3D Ribonuclease Inhibitor 190 285 IPR032675 -
Rops11g02049 957 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Rops11g02049 957 Gene3D Ribonuclease Inhibitor 286 387 IPR032675 -
Rops11g02049 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 767 949 - -
Rops11g02049 957 Pfam Leucine rich repeat 294 353 IPR001611 GO:0005515
Rops11g02049 957 ProSiteProfiles Protein kinase domain profile. 671 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02049 957 PANTHER UNNAMED PRODUCT 11 169 - -
Rops11g02049 957 SUPERFAMILY Protein kinase-like (PK-like) 705 941 IPR011009 -
Rops11g02049 957 SMART LRR_typ_2 268 291 IPR003591 -
Rops11g02049 957 SMART LRR_typ_2 196 220 IPR003591 -
Rops11g02049 957 SMART LRR_typ_2 100 124 IPR003591 -
Rops11g02049 957 SMART LRR_typ_2 340 364 IPR003591 -
Rops11g02049 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 682 766 - -
Rops11g02049 957 FunFam Leucine-rich repeat receptor-like protein kinase TDR 313 626 - -
Rops11g02049 957 FunFam Leucine-rich repeat receptor-like protein kinase 27 189 - -
Rops11g02049 957 SMART serkin_6 705 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02049 957 SUPERFAMILY L domain-like 62 401 - -
Rops11g02049 957 Pfam Leucine rich repeat N-terminal domain 29 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02049 Rops-Chr11 33449376 33452878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02049 6 942 Receptor kinase-like Gene Family AT5G51350 55.415 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops11g02049 PK_Tyr_Ser-Thr 1.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02049 - - aprc:113852384 1620.14